Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g4954 ATGGAGAGTCCTCCTCGTCATCCCTCTTATGTGATCGTTGCGTGTGATGCCACCAGGGACCGAAATGAGCACGAGATTAAGACTGTAGTTGATCATGTTCGGGCCAAGGGTATTATTCTCTCTGCTGGTGATAAGTTGCTTGTGCTCTGTGTCTTGCATAAGGTGTCTCACCCTATGGGGTACCAGACATTAGCTTGCCTGGAGTCTTTTGCTGGTACAAACTTCCGTTCAATGGAGGAAGAAGTCAAAAAGAAATTGGATGTGTATTCAAATGAGCTTTTATCAAGTTATGAAGATTTTGAAAATGTTAGCATTGAAGTTCAAGTCACTGCAGGTTTTCCAATTAGACAGGTTATTTTACAAGAGGTTATGAACTATAATGCATCTTGGATTGTACTTGATAGATACCTTCGGCGCGACCTGAGATTCCACCTTAACAAGATGCCCTGTAAGGTGGCATTGGTTAAAGATGACTTGTCTTTGGACATATGGAGATCTCATTACTCAAATGATAAAATTGTCACAGAAACAAAGCTTGTTTATTCCTTATCCAAGATTGTGTCTCTATCACAATATCATAGTAACCAAGATTTTGATCATTCTATTCACTCTTGCAAAAGTTATCCACGTTCCATAACTTCTTCTGATAGCTCTACCACGATTAAGAGCTACACAAAGCATTCACACACTAACAGGTCACGGGATCACAACTCCTCTGATTTTGGATCTTCTGCTAAGATAGAAAAATCAGGTACGAGCACCAAAGGAGAGTACAGACAATTCATTACTTCTCATATTGGCCAAAAGCAAAACCAAGGTGATTTTCTACCAAAGTCATCAGATGCACCAATTCTCTGTAATGGCTGTGGGACAAGGACTGAGTTGTCTATCAATGAGTCTATGAGGTTCACCTATCCTGAGATACAGCTTGCCACTAATGAATTTTCAAGGAATAACTTAGTAGGTGAAGGTGGTTATGGTCATGTTTACAAGGGTGTGCTTAAAGATGGACAACAAATTGCTGCAAAGGTAAGGAAAGAAGAAAGCACACAAGGGTTTTCTGAGTTTCATTCTGAGGTGTATGTCTTGAGTTTTGCTCGACACAAGAATATAGTGATGTTGTTGGGTTATTGCTGCAAAGAACGGAAAAACATTCTGATATACGAGTATATCTGCAATAAGAGTCTCCATTGGCATTTATTTGAAAATACTGGAACAGTTCTTGATTGGCACCAAAGGTATGCTATTGCCATTGGGACTGCAAAGGGATTACGTTTTCTACATGAGGAATGTCGTGGGGGTCCTATTATTCATCGCGACATGCGACCAAGCAATATACTCCTTACTCATGATTTTGTTCCCATGCTAGGTGACTTTGGCCTTGCCAAATGGAAGACTGGTGATGATCCTCTTCAAACAAGGATAATGGGCACATTAGGATACCTTGCTCCAGAGTATGCTGAAGAGGGTATTGTTTCTGAAGGGACAGATGTATATTCTTTTGGGGTTATTTTGATACAATTGATATCAGGACGCCTAGTAGGAAATTCCAATAATCCAGAAAAACACCAGCAATCTCTCCGACAATGGGCTGAACCAATTATTGAGAAGTTGGCTTTACATGAAATGCTTGACCCTCGTCTTGGTGAATCATGTGACACGTATGAACTATACCTTATGGCTAAAGCAGCATGCCTTTGTATGCAAAGAAAGCCAAATATGAGACCCTCAATGGGAGAGGTTGTGCGCCTTCTTGAGGGAGAAAGTAGCCACTTCCTCTTCTTGGAAGATCAATTTGCACCTAATCACAATTAA 1815 0.4055 MESPPRHPSYVIVACDATRDRNEHEIKTVVDHVRAKGIILSAGDKLLVLCVLHKVSHPMGYQTLACLESFAGTNFRSMEEEVKKKLDVYSNELLSSYEDFENVSIEVQVTAGFPIRQVILQEVMNYNASWIVLDRYLRRDLRFHLNKMPCKVALVKDDLSLDIWRSHYSNDKIVTETKLVYSLSKIVSLSQYHSNQDFDHSIHSCKSYPRSITSSDSSTTIKSYTKHSHTNRSRDHNSSDFGSSAKIEKSGTSTKGEYRQFITSHIGQKQNQGDFLPKSSDAPILCNGCGTRTELSINESMRFTYPEIQLATNEFSRNNLVGEGGYGHVYKGVLKDGQQIAAKVRKEESTQGFSEFHSEVYVLSFARHKNIVMLLGYCCKERKNILIYEYICNKSLHWHLFENTGTVLDWHQRYAIAIGTAKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLAKWKTGDDPLQTRIMGTLGYLAPEYAEEGIVSEGTDVYSFGVILIQLISGRLVGNSNNPEKHQQSLRQWAEPIIEKLALHEMLDPRLGESCDTYELYLMAKAACLCMQRKPNMRPSMGEVVRLLEGESSHFLFLEDQFAPNHN* 605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g4954 604 SUPERFAMILY Protein kinase-like (PK-like) 297 586 IPR011009 -
Lja1g4954 604 CDD STKc_IRAK 321 587 - -
Lja1g4954 604 ProSiteProfiles Protein kinase domain profile. 315 594 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja1g4954 604 PANTHER RECEPTOR-LIKE KINASE 9 597 - -
Lja1g4954 604 ProSitePatterns Protein kinases ATP-binding region signature. 321 343 IPR017441 GO:0005524
Lja1g4954 604 ProSitePatterns Tyrosine protein kinases specific active-site signature. 436 448 IPR008266 GO:0004672|GO:0006468
Lja1g4954 604 Gene3D Transferase(Phosphotransferase) domain 1 392 594 - -
Lja1g4954 604 MobiDBLite consensus disorder prediction 228 242 - -
Lja1g4954 604 MobiDBLite consensus disorder prediction 209 254 - -
Lja1g4954 604 Pfam Protein kinase domain 316 582 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja1g4954 604 MobiDBLite consensus disorder prediction 209 226 - -
Lja1g4954 604 Gene3D Phosphorylase Kinase; domain 1 288 390 - -
Lja1g4954 604 PANTHER OS01G0253100 PROTEIN 9 597 IPR045271 GO:0004714|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g4954 Lja-Chr1 68964025 68969005 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g4954 298 586 Trihelix Transcription Factor Family AT5G38560 43.581 7.77e-76 253
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Lja1g4954 Pkinase 4.6e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g4954 - - vun:114163670 968.378
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g4954 1 68964025 68969005 Lja1g4954 1 68964025 68969005 ECH