Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g4944 ATGACTGAGGGAAGAGGCAGTGCATCTTTACCTACGGTGGTTGTTACAGTAGGGATTTCACTACTATGCCTGTTGGCTCTGCAGGTGGAACATGCTAATGCAGCAACTTACACCGTTGGAGGACCAGCCGGATGGAGCTTCAACACTGATACTTGGCCTAATGGGAAAAAGTTCAGAGCTGGCGATGTGCTGATCTTCAACTATGACTCAACAACACACAACGTGGTTGCGGTGGACCAAAGCGGTTACAAAAGCTGTACAACGCCGGCGGGTGCTAAAGTGCTGAGTTCAGGAAAGGACCAAATCAGGCTAGGAAGAGGGCAGAACTACTTCATATGCAACTGTCCTGGTCACTGCCAATCTGGGATGAAGGTTGCCATCAATGCACTGTGA 393 0.4962 MTEGRGSASLPTVVVTVGISLLCLLALQVEHANAATYTVGGPAGWSFNTDTWPNGKKFRAGDVLIFNYDSTTHNVVAVDQSGYKSCTTPAGAKVLSSGKDQIRLGRGQNYFICNCPGHCQSGMKVAINAL* 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g4944 130 PANTHER BLUE COPPER PROTEIN 13 128 IPR039391 GO:0009055
Lja1g4944 130 ProSiteProfiles Phytocyanin domain profile. 35 130 IPR003245 GO:0009055
Lja1g4944 130 Pfam Plastocyanin-like domain 46 123 IPR003245 GO:0009055
Lja1g4944 130 Gene3D - 35 129 IPR008972 -
Lja1g4944 130 CDD Plantacyanin 35 129 IPR041844 -
Lja1g4944 130 SUPERFAMILY Cupredoxins 35 129 IPR008972 -
Lja1g4944 130 ProSitePatterns Type-1 copper (blue) proteins signature. 107 123 IPR028871 -
Lja1g4944 130 PANTHER BASIC BLUE-LIKE PROTEIN 13 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g4944 Lja-Chr1 68582829 68585014 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g4944 1 130 Phytocyanin Superfamily AT1G17800 43.066 8.82e-28 98.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g4944 - - lja:Lj0g3v0108379.1 271.166
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g4944 1 68582829 68585014 Lja1g4944 1 68582829 68585014 ECH