Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g4924 ATGGAGGCTAAGATTAAGATGATGTCAGAGGTGCTTCCATTCATAATCATGGTGATTATGGAAGGCTGCACCATAGGACTAACAATATTTACAAAAACTGCAATAACTAATGGAATGAGCCCATTTGTGTTCATTGTTTCTACAAATGCTCTGGCCACTATAATTCTGTTTCCTTGTTCTTTTTTATCACACCACAAGGACAGAAAGGAGAGTCCACCTTTTACTTTCTCTTTGTTCATGCGATTCTTGGTCCTGGGTTTTACAGGAATAACCATGACTCAGACATTTTTATACCTGGGTCTAAGCTACAGTTCTCCAATACTTGTATGTGCCATGGGCCACTTGATCCCAACATTCAATTTCCTGATCTCTGTCATTCTCAGGAAGACAAAGTTGAATTTGAGAAGCTCTACTACACAAGTCCAATTGATTGGTATCATGGTATCAATAATGGGAGCAGTGCTAGCTGAATTCTTCAAGGGCCCACTTATAAGACCCTCTTCTCACCACCTTAAACACACTAAGCAACTTTTTGTCTTCTCCTCAACACCAGAGTTTTGGGTTCTTGGTGGCATTTTGCTTGCTGCAGCTTCTTTTTCAACAGCAATTTGGAACTTCATCCAGAAAGAAACTGTTCAGCAATATTATCCAGAACCAATGAAGGTGGTTTCTTATTATTGCTTGCTTGGAACGATCCTTAGTGCAATAGTCTCATGGATAGTGGAGAGAGATGCAAATGCTTGGAAGCTAAAACGTGACATGGACCTCATTCTCATTGTTCTAACCGCACTATTTGGGGGTGTGATTCGTCCTAATATTCAAGTGTGGTTCACTCGTATGAAGGGTCCACTTTATGTGCCACTATTCAAGCCCTTTGGTGTTGCCTTTGCCACCACTTTTGGAGTTTGCTTCTTTCCTAACAGTCTTCATTATGGAAGTGTGATAGGAGCAGCTATACTTGGAATGGGGTATTATACAGTATTTTATGGAGAATTCAAAGGAGATGATGAAGAAGAGAACAGCTGTGACTATGACGAAAGCTCAGATTCTTTGGACAAGAAGATACCTCTGTTGCAAGAAAAGATGGAAGTGTAA 1095 0.4037 MEAKIKMMSEVLPFIIMVIMEGCTIGLTIFTKTAITNGMSPFVFIVSTNALATIILFPCSFLSHHKDRKESPPFTFSLFMRFLVLGFTGITMTQTFLYLGLSYSSPILVCAMGHLIPTFNFLISVILRKTKLNLRSSTTQVQLIGIMVSIMGAVLAEFFKGPLIRPSSHHLKHTKQLFVFSSTPEFWVLGGILLAAASFSTAIWNFIQKETVQQYYPEPMKVVSYYCLLGTILSAIVSWIVERDANAWKLKRDMDLILIVLTALFGGVIRPNIQVWFTRMKGPLYVPLFKPFGVAFATTFGVCFFPNSLHYGSVIGAAILGMGYYTVFYGEFKGDDEEENSCDYDESSDSLDKKIPLLQEKMEV* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g4924 364 Pfam EamA-like transporter family 190 328 IPR000620 GO:0016020|GO:0016021
Lja1g4924 364 Pfam EamA-like transporter family 15 155 IPR000620 GO:0016020|GO:0016021
Lja1g4924 364 SUPERFAMILY Multidrug resistance efflux transporter EmrE 50 158 - -
Lja1g4924 364 PANTHER WAT1-RELATED PROTEIN 9 361 IPR030184 GO:0016021|GO:0022857
Lja1g4924 364 PANTHER WAT1-RELATED PROTEIN 9 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g4924 Lja-Chr1 67772793 67775387 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g4924 1 363 Nodulin-like Gene Family AT1G70260 48.663 9.75e-122 354
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g4924 - - gmx:100803495 573.933