Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g4920 ATGGGGAAGGTGAGAGCTGCGTTTGTGGGAATGATCATGGCAGAGTGTGCTCAAGTTGGTTTAATCATATTGAGCAAACAAGTCATGGCACAAGGCATGACCAATTTCATCTTCATCTTCTACTCCAACACAATCGCTTCCCTCATTCTTCTTCCCACTTCATTCTTAGTCCACAGATTTCAACGCCCTCCTATCACTTTCTCCATCCTTTGCCAATTCTTCTTGCTTGGATTACTCGGATTTTTGGCTCAGGCTTTTGGGTATGCTGGGATTAACTACAGCTCACCGACGCTTGGTACTGCCATGCTCAACCTTATTCCTGGTTTTACCTTCATACTTGCAGTTGCTTTCAGAATGGAACTATTGGATTGGAAAAGCTCTAGTACCCTTGCTAAATCACTGGGAACAATAGTATCAATTACTGGTGCATTTATTGCGACATTGTACAAAGGCCCTGCACTTCTGATGGGGCTATCACCTTCAAACTCATCTCAGCAGCCAGTTTCCTCTCAAGATTCTAATTGGATACTTGGAGGATTATTTCTCGCAGCTGATTGCGTAATGGCTTCAGGATTTTTAATTTTACAGGCTTCTATTCTTAAGAAATATCCAGCAGGGTTGATTACTGTATTCTTTTATACTTTCTTTGTGGCCATTCAATCTGGTGTGACCTGTTTGGTTGTGGAAAGAGACATCAGTGCTTGGAGCTTGGAACCAATGTTTAGGTTGCTTGCTGTTTTATACTCGGGAGTCATGGGCTCTGCATTTCAAGTCGGTGTTACTACTTGGTGTTTACACCAGACAGGACCTGTTTTTGTTTCCATGTTCAAGCCCATAGGCATTGTCATATCGGTGGTTGTAGGTGTTGCCATCCTTGGAGATGCATTCTATCTTGGAAGTCTGGTTGGTGCAACTGTGATTGTTCTTGGGTTTTATTCTGTACTGTGGGGGAAATCCAAAGATATTGAAGTGAAAAGCTTGGAATCAAGGGGGAAACAGACCCCTCTTTTGAAGGAAAACAGCAGTGAAGACATTTAA 1038 0.4268 MGKVRAAFVGMIMAECAQVGLIILSKQVMAQGMTNFIFIFYSNTIASLILLPTSFLVHRFQRPPITFSILCQFFLLGLLGFLAQAFGYAGINYSSPTLGTAMLNLIPGFTFILAVAFRMELLDWKSSSTLAKSLGTIVSITGAFIATLYKGPALLMGLSPSNSSQQPVSSQDSNWILGGLFLAADCVMASGFLILQASILKKYPAGLITVFFYTFFVAIQSGVTCLVVERDISAWSLEPMFRLLAVLYSGVMGSAFQVGVTTWCLHQTGPVFVSMFKPIGIVISVVVGVAILGDAFYLGSLVGATVIVLGFYSVLWGKSKDIEVKSLESRGKQTPLLKENSSEDI* 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g4920 345 PANTHER WAT1-RELATED PROTEIN 8 325 - -
Lja1g4920 345 SUPERFAMILY Multidrug resistance efflux transporter EmrE 49 148 - -
Lja1g4920 345 PANTHER WAT1-RELATED PROTEIN 8 325 IPR030184 GO:0016021|GO:0022857
Lja1g4920 345 Pfam EamA-like transporter family 180 315 IPR000620 GO:0016020|GO:0016021
Lja1g4920 345 Pfam EamA-like transporter family 20 145 IPR000620 GO:0016020|GO:0016021
Lja1g4920 345 SUPERFAMILY Multidrug resistance efflux transporter EmrE 235 319 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g4920 Lja-Chr1 67735792 67738564 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g4920 8 344 Nodulin-like Gene Family AT5G40240 42.274 4.83e-91 275
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g4920 - - gmx:100804932 515.768