Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g4919 ATGAATCACCAGCAAATAATCAACTTTGCTTCTTCTTCTTCTTCTTCTTCTTCAATGGGGTCTCAATCTCATCCCAAAAAGCATGATGTTTTTCTTAGCTTTCGAGGTGAAGACACACGTGACAACATCACAAGCCATCTTCATGAGGCTCTAATCCAAAAGAAAATTGAAACCTACATAGACTACAGGCTTGAAAAGGGAGATGAGATCTCATCAGCACTCATCAGAGCAATTGAAGAGTCACATGTATCTGTTGTCATCTTCTCAGAAAACTATGCTAACTCCAAGTGGTGCTTGGATGAGATCACTAAGATTATAGAATGCATGAAGGATCATGGACAGGTTGTTATACCTGTGTTCTACAAAGTAGATCCATCACATGTAAGGAAGCAGACAGGGAGCTTCAAAGAAGCGTTTGCAAAACATGAGGTGGATCTGAAGGGTAACAATGAAAAGGTGCAGAAATGGAAATCTGCTCTCACAAAAGCAGCCAATTTGGCTGGGTGGGACTTTCAAACTTACAGGACTGAATCTGGATTTATCAAGGACATTGTTGAAGATGTTTTACACAAACTGAATCTCAGATACCCAATTGAATTAAAAGGACTGGTTGGAATTGAGGGTAACTATGTAGAGGTTGAACCCTTATTGAAAATTGGCTCAGGTAAAGTTCGAATGATTGGAATATGGGGCATGGGTGGCATAGGTAAGACAACCTTGGCAATTGCTTTACATGCCAAACTGTCTTCTCAATTTGAAGGTGTTTGCTTTCTCGCAAGTGTAAGGGAACTGTCAGAAAAGTTTGGTCTAGATACCTTACGTAACAAACTTCTTTCTCAACTGTTGGGTGAAGAAAATCTCCATGTTGATGTACCCAAAGTTGAATCCCAATTTGTGGCGAGTAGGCTTAGACGAAAAAAGGTTCTTATTGTCTTGGATGATGTGGCTACATCAGAGCAGTTAGAAGGTCTAATTGGTGAGTACGATTTTTTGGGACCGGGAAGTAGGGTGATCGTAACAACTAGAGATAAGCACATATTTAGCCATGTTGATGAAGTATATGAGGTCAAGGAATTGAACGACACTGACTCTCTTCAGCTTTTCTGCTTGAATGCCTTCAGAGAAAAGCATCCTAAAAATGGATACGAGGAGCTATCAAAAAGTGTAATTTCCTACTGCAAAGGAAATCCTTTGGCTTTAAAAGTTCTGGGTGCACGTCTTCGTTCGAGAAGTACAGAAGCATGGAAAAGTGAAGTGAGAAAGCTCCAAAAGATTCAAGAAGTGAAAATTCACAATGTATTAAAATTAAGTTTTGATGACTTGGATCGCACAGAGCAGTGCATATTTCTAGACATTGCATGTTTCTTAAAAGGAGAATCCAGAGATCATGTAACGAGTCTACTTGAAGCTTGTGATTTCTATGCAACTATTGGGATAGAAGCCCTTTTGGATAAGTCCCTGATAACTATTTCAGTTAAGGATACAGTAGAAATGCATGACTTGATACAAGAAATGGGCCATAATATTGTTGATCAGGAATCTATCAATGATCCTGGGAAACGAAGTCGATTGTGGGATCCTCAGGAAGTATATGATGTGCTGAAATATAATAGGGGAACTGAAGTTGTAGAAGGCATAATTTTAGATGTGTCTATAATAAAGGATCTTCATTTGAGCTATAATTCCTTTACAAAAATGTGCAACATAAGATTTCTCAAATTCCATTCTGATATGCGGAGTGATAGGTGCAATATATACCTTCCTAATGGTCTTGAGTCATTGCCTCACAAATTGAGGTACCTACAATGGCACGGATACCATATGGAGTCTTTGCCATCATCCTTCTCTGCTAAATTCCTTGTAGAGCTTTCCATGCCCAACAGCCACCTAGAAAAGCTTTGGGACGGAGTTCAGGATCTTGTGAATTTAAAAGAAATCGACCTTGCTTTCTCCCAAAACCTTGTTGAGGTCCCAGATTTATCTATGGCCACAAAGCTAGAAGGGCTATCTCTTCTTGAGTGTAAAAGTTTGCGTGAAGTTCATCCATCCATTTTGTGTCTCCACGAGCTTAAATTTCTGGATTTAGGAGGCTGCACAGAGCTTGAAACCCTTCAAACCGAAATTCATTTAAAATCTCTCCATTACCTTCGCCTAAGCAACTGCTCATCCTTGAAGGAATTTTCAGTCTCCTCAAAGGAACTAAAGGAACTGTGGCTAGATGGTACAGTTATCCAAGAACTACCCTCATCAATTTGGCACTGCGAGAAGCTTTCACTTGTTAATCTACAAGGTTGTGATCATATTGACACTTTTGAGAACAATAAGTTACCTTATAATCTGGGAATGGGATCCCTTACACGTCTGGTCCTTTCTGGCTGCAAGCAACTCAAAGCGTCGAACCTATGTTCTATCCTTGATGGTCTACAATCTTTATTATTGTTGGATGTGGAAAACTGTTGCAACTTAGAAGAACTCCCTGACATCATTGGCTTGTTACCATCATTGACATGTTTAAAACTAAGTGGAAGCAGCATTGAGAGCTTGCCTGCAAACATCAAGAACCTCTTGATGCTAGAAGAGCTGTGGTTAGACAACTGCATGAAACTTGTGTCTCTACCGGAGCTTCCGCCATCGCTGCACATGTTAAGCGCCATTAACTGCACATCTCTGGAGACAGACTTCACTGAATTGCGAGTGCTACAACATCCCAGATTTGTTCTCCTCCCTGGTGCCCGAGTTCCGGACTGGTTTACCTATCGTTCTGAAGAGACTTGGATAACTATTCCAAATATTTCTCTATCTGGCTTATGCGGCTTTATTTTCTGCGTCGTTGTTTCTCAGTTGACTACAAATGGTAAAGATAAATATGTTGAGTATAATATCTACAACTATTCCAACAGAATCCATAGCTTTCTGGGCGACCAAAACTTGATTTCAGATCATGTGTTTCTATGGTATCTTGACATCACGAAAGGTGGGGACAATTCTTTTCATAAGAAAATGCCACAAAGTGGAGTGTTTAATCCTTTCAACATATTTAAATTCAGTGTTATTGGTGAAGATGGACAATGGTCAAAGACGAAAGTAAAGGCGTGTGGGGTCTACCCGGTGTCTGCCTTTGAGTTAGAACCCTTCAGTGCACAAGATATTGATGAGTTACAACCTAGAGCCAGTGGAATTGGATGTATAGGTTCTAATCATGACAAAGATAATTACCAGATTGAGAAATTGCAGGAAGAGCACCAAACCACTTCATCATGTACGCAAGATGAAAAAAATGACTTAGATGAAAAATCTCCATGTCACAGTGTCACTGAACTCAGCTGTGAGAGAAAACCACAAAGTTCGAAGGATGAGGATTGCTGTAAAAGTTCAATGGCTGAAAATCAAATTATCTGCTTTGACACACCAAGTGCTTCTAACATCAATTCAAGCCAGACTATTAAACTGTCAGAAGAAAAAGACTTGACAGACAATCAGCATCTTGAACCAGATTCTGATCCGTTTGCCGAGCTTGAGAGCATGTTATTTGATAGTTATAAGTTGTCTCCACTGTCCACTCACTCAGTTGTTTCAGAGACTAAAGTCCAGAACCTCCTTGAAAAATTAGAGACGCTTTTGGAAACTTCCCTTGAAGTTATTTCTTTAGATGATGAAGTCAAGCAACAACTACTTCATGTATTGGAGCAACTTGACCTATTTGAAGACCAAATCCCTGTCAAGCTTCAGCCGGTAATTTACAAGTTAAAACATTTCATTGAAGGTGTTGATGTAAAATTTGTGACTGCCCAAAAAACTATCCATGATTATGATCAGCTTGTACAGTCAAGATCTCTTCTGTCAGAACAACTGAGAAGTGCCAAAGCCAGCCAAGAGCACATTAATTCAAAAGTCTCTCAACATAAAATACAATTTGAAGAGATCAATTCTGAGATTTCTGAACTAGAAGAAAAATTAAGGGGTTTGATTGAGACCAGAGACAGGCTGAAGAGAGAAATGGATTGTTGTGATGTTGAAAGTGGGAAATTAAAGGCTCAGGTTGCTCAATGGGTTCCAGATTGCAAGAATATCATCACAGATTTAAAGAAGTATGAGACTTCTTACAAAGTGGCCCTAACTAATAAGAAGATAGTTGAAGATGAATGGGCAGATCTGAAGAAGAACTTTGCAGCCAGTAAGATTTGA 4185 0.395 MNHQQIINFASSSSSSSSMGSQSHPKKHDVFLSFRGEDTRDNITSHLHEALIQKKIETYIDYRLEKGDEISSALIRAIEESHVSVVIFSENYANSKWCLDEITKIIECMKDHGQVVIPVFYKVDPSHVRKQTGSFKEAFAKHEVDLKGNNEKVQKWKSALTKAANLAGWDFQTYRTESGFIKDIVEDVLHKLNLRYPIELKGLVGIEGNYVEVEPLLKIGSGKVRMIGIWGMGGIGKTTLAIALHAKLSSQFEGVCFLASVRELSEKFGLDTLRNKLLSQLLGEENLHVDVPKVESQFVASRLRRKKVLIVLDDVATSEQLEGLIGEYDFLGPGSRVIVTTRDKHIFSHVDEVYEVKELNDTDSLQLFCLNAFREKHPKNGYEELSKSVISYCKGNPLALKVLGARLRSRSTEAWKSEVRKLQKIQEVKIHNVLKLSFDDLDRTEQCIFLDIACFLKGESRDHVTSLLEACDFYATIGIEALLDKSLITISVKDTVEMHDLIQEMGHNIVDQESINDPGKRSRLWDPQEVYDVLKYNRGTEVVEGIILDVSIIKDLHLSYNSFTKMCNIRFLKFHSDMRSDRCNIYLPNGLESLPHKLRYLQWHGYHMESLPSSFSAKFLVELSMPNSHLEKLWDGVQDLVNLKEIDLAFSQNLVEVPDLSMATKLEGLSLLECKSLREVHPSILCLHELKFLDLGGCTELETLQTEIHLKSLHYLRLSNCSSLKEFSVSSKELKELWLDGTVIQELPSSIWHCEKLSLVNLQGCDHIDTFENNKLPYNLGMGSLTRLVLSGCKQLKASNLCSILDGLQSLLLLDVENCCNLEELPDIIGLLPSLTCLKLSGSSIESLPANIKNLLMLEELWLDNCMKLVSLPELPPSLHMLSAINCTSLETDFTELRVLQHPRFVLLPGARVPDWFTYRSEETWITIPNISLSGLCGFIFCVVVSQLTTNGKDKYVEYNIYNYSNRIHSFLGDQNLISDHVFLWYLDITKGGDNSFHKKMPQSGVFNPFNIFKFSVIGEDGQWSKTKVKACGVYPVSAFELEPFSAQDIDELQPRASGIGCIGSNHDKDNYQIEKLQEEHQTTSSCTQDEKNDLDEKSPCHSVTELSCERKPQSSKDEDCCKSSMAENQIICFDTPSASNINSSQTIKLSEEKDLTDNQHLEPDSDPFAELESMLFDSYKLSPLSTHSVVSETKVQNLLEKLETLLETSLEVISLDDEVKQQLLHVLEQLDLFEDQIPVKLQPVIYKLKHFIEGVDVKFVTAQKTIHDYDQLVQSRSLLSEQLRSAKASQEHINSKVSQHKIQFEEINSEISELEEKLRGLIETRDRLKREMDCCDVESGKLKAQVAQWVPDCKNIITDLKKYETSYKVALTNKKIVEDEWADLKKNFAASKI* 1395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g4919 1394 SUPERFAMILY L domain-like 498 891 - -
Lja1g4919 1394 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 20 1086 IPR044974 GO:0006952
Lja1g4919 1394 Coils Coil 1298 1332 - -
Lja1g4919 1394 PRINTS Disease resistance protein signature 393 407 - -
Lja1g4919 1394 PRINTS Disease resistance protein signature 226 241 - -
Lja1g4919 1394 PRINTS Disease resistance protein signature 302 316 - -
Lja1g4919 1394 PRINTS Disease resistance protein signature 708 724 - -
Lja1g4919 1394 SMART till_3 27 166 IPR000157 GO:0007165
Lja1g4919 1394 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 20 1086 - -
Lja1g4919 1394 ProSiteProfiles TIR domain profile. 26 192 IPR000157 GO:0007165
Lja1g4919 1394 SMART AAA_5 223 360 IPR003593 -
Lja1g4919 1394 Pfam Leucine Rich Repeat 619 638 IPR011713 -
Lja1g4919 1394 Pfam TIR domain 27 198 IPR000157 GO:0007165
Lja1g4919 1394 Gene3D - 25 195 IPR035897 -
Lja1g4919 1394 MobiDBLite consensus disorder prediction 1 24 - -
Lja1g4919 1394 Pfam C-JID domain 908 1041 IPR045344 -
Lja1g4919 1394 Gene3D - 358 442 IPR042197 -
Lja1g4919 1394 Gene3D Ribonuclease Inhibitor 522 732 IPR032675 -
Lja1g4919 1394 Gene3D Ribonuclease Inhibitor 733 903 IPR032675 -
Lja1g4919 1394 Pfam NB-ARC domain 220 432 IPR002182 GO:0043531
Lja1g4919 1394 Gene3D - 196 357 IPR027417 -
Lja1g4919 1394 MobiDBLite consensus disorder prediction 1 26 - -
Lja1g4919 1394 MobiDBLite consensus disorder prediction 1079 1099 - -
Lja1g4919 1394 MobiDBLite consensus disorder prediction 1085 1099 - -
Lja1g4919 1394 SUPERFAMILY Toll/Interleukin receptor TIR domain 20 169 IPR035897 -
Lja1g4919 1394 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 192 452 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g4919 Lja-Chr1 67697031 67703457 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g4919 785 908 WRKY Transcription Factor Family AT4G12020 35.433 1.92e-08 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g4919 - - gsj:114410062 1670.98