Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g4917 ATGCAGGAGGTCCGAAAACGTAGCTGCACTGTACGGAGTATCTTCCCTGCAGATTTGCAAATCTGCTGCAATCTTCCCCTCTTCCCCATTTGCCCCCCTCATCCACGAAATATTATTTTGCAAATTTGCTGCAATCCGGCAATTATTTTGCTGATAAATGAAATTGCCGGATTTCATATCTGTTTCTTTACATATTGTCGGCGGGGAAGGTTGTCGGTTGAGAGACCTTCGTCTTTCGACGGCCACAACGCCGTAGCTCCGACTCCGCTCCGCCGTCCGAAGACTGACCCTGATCTTCTGTCATACCGGAACCACGCCGGATCGCCGCCAAAGCTGCTCCTGAAGGTGACGGTTCTTGGAAGCCTCGGGCCTGTGCAGATTCTCATGAGGCCGGAATCCACCGTCGGCGAGTTGATGGCGGTGGTGGCGCGGCAGTACGTGAAGGAAGCTCACCGTCCGATCCGGTCGACCAACGATGCCTCCATTTCGACCTTCATTACTCGTAGTTTGCATAGGGAGGAGAAACTGGTGCAAGATGCTAAGTTTGTGTTTGAGGCAAAGACTATTCTGAAAATGGAGCTTCTAGTTCTGTCCACACTCAAATGGAAGATGCATCCTGTGACTCCACTTTCATTTCTAGATCACAGTATCAGAAGGCTTGGATTGAAAACCCACCTTCACTGGGAGTTTCTCAGGCGCTGTGAGCATCTTCTTCTGTCTCTGCTTTTAGATTCAAGATTTGTTGGTGTTCTTCCTTCTGTGTTGGCCACTGCAACAATGCTGCATGTTATAGACCATATTGAGAATAGTGATGGGGTGGAATACAAAAAGCAGCTTCTGGGTGTTCTCAAAATTAACAAGGGGAAAGTAGATGAATGCTATGATGCCATGCTTGAGCTTACTAATGCCAATGATTATGATGATAACAAGAAGGTTAATAAGCGCAAGTATGAGGAAATAATCCCTGGTAGCCCAAGTGGCGCCATTGATGCTGCTTTTAACTCTGATGGTTCCAACGATTCGTGGACAGTGGGATCTGATTCTTGCTTTGTCCTGGAAATGAGTCCGAGAGGTTCTTTTCATGAATCAACTTTGGCTTCCAGTGACGTGGAATTTCATAGTCCAACATTAAAAAATATCATGGAAACTGACAATGAAGTATTTCAAGAATCAAAACAGTGGGAGCAAGAAAGTAGATATATCTCACAAAAACAAATGGAGTCTCTTGCTGGTGTTATGGATGAGGAGGTGATTGGCATCATAACAATGGAGGATGTTATGGAGGAACTATTACAGGGAGACATACCAGGTGAAACTAATGATGCTCATAGCTGCCAAAAACATAGGCACGGACAATCCAGCTGCCAAAATCTTCCTCCGCCGTATTGTATCTCCGGAAGATTTTCTTGA 1410 0.4589 MQEVRKRSCTVRSIFPADLQICCNLPLFPICPPHPRNIILQICCNPAIILLINEIAGFHICFFTYCRRGRLSVERPSSFDGHNAVAPTPLRRPKTDPDLLSYRNHAGSPPKLLLKVTVLGSLGPVQILMRPESTVGELMAVVARQYVKEAHRPIRSTNDASISTFITRSLHREEKLVQDAKFVFEAKTILKMELLVLSTLKWKMHPVTPLSFLDHSIRRLGLKTHLHWEFLRRCEHLLLSLLLDSRFVGVLPSVLATATMLHVIDHIENSDGVEYKKQLLGVLKINKGKVDECYDAMLELTNANDYDDNKKVNKRKYEEIIPGSPSGAIDAAFNSDGSNDSWTVGSDSCFVLEMSPRGSFHESTLASSDVEFHSPTLKNIMETDNEVFQESKQWEQESRYISQKQMESLAGVMDEEVIGIITMEDVMEELLQGDIPGETNDAHSCQKHRHGQSSCQNLPPPYCISGRFS* 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g4917 469 PANTHER CYCLIN D3.1 PROTEIN 176 343 - -
Lja1g4917 469 Gene3D - 206 296 - -
Lja1g4917 469 Pfam Cyclin, C-terminal domain 207 318 IPR004367 -
Lja1g4917 469 PANTHER CYCLINS 176 343 IPR039361 -
Lja1g4917 469 SUPERFAMILY Cyclin-like 188 302 IPR036915 -
Lja1g4917 469 SMART Cyclin_C_2 207 326 IPR004367 -
Lja1g4917 469 Gene3D - 174 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g4917 Lja-Chr1 67682714 67685912 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g4917 177 300 Core Cell Cycle Gene Families AT4G34160 58.871 3.94e-45 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g4917 K14505 - lja:Lj1g3v0913090.1 296.589