LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lja1g4847	ATGGCACTTTGTAGAACTGGGCCAAACACGATTCCGAATAGTAATGGCTTAGCTAGTTCAGCTAGAAATTTGTCGACAAGACTTGTTTTACCAGTTCCCCTGGGTTTCACTGGACAGTTATCTAACTTAGGCAGGAGAAAACACAGGGGAGTAGTATGCTCATCATTAAGGAAATCTGCATCTGCATCTTCTAAGGAGTCACAAGAAGAAGATGCTCCGAGTACCCTTTCAGTTTGCTTGGAGGAGGAACTGGGTCATGTTATACGGTTCAAAATGTCAGACTTTAAGATTTTAAATCATGTTAGCATTGGCCTTGGTGGACGGGGGGATGAATTAGTTTTTGAAGGCAAGGTGAAGGATAGTGGTAGCCCTTTGTATAGCACAAGAGTTGTACTTCGACAGCTTTCTAGTGCCCAAGCTCAACGTCGGGGCAAACGAGCAATAGAGGTATTGAAGAAGCTGGTTAGACGTAAACTTTTGTATCATTCTTACTCGATGCAAGTTCATGGCTATATCTCTTTGCCAGAGAGTAATGACAGTGGCTCATTTATCCTAGTCCATGGGTATCATGGTAGTTTTTCTTTGAGACACTGGCTTCAACGGTCAGATTGGCTTCCAACTTTAGAGGCCACTCTTGCACTGGACGAAGAGTCTGTTAGGAAGATAGGAGAAGACACAACTGGAGGTCCTGCAGTTTCTAGGCAGTTGCGACTTATTCGAATATTGATGAGGGATCTTCTGATCGGGGTAAATTACCTGCATAGCCATGGTTTTGCCCATACAGAGTTGAGGCTGGAAAATGTGCATATAAGCCCAATAGACAGACATATCAAAGTAGGTATACTTGGAAATGCTGCTGACTTTCATGTGGAAGGTTCAAATAGCGGCACTATGGACAGCATGGACAGGCGGCAGATGATGATTGCTTTTGACATGAGATGTGTCGGTTTCATAATGGCAAAAATGGTAATACGAGAGCTTATGGAACCTTTGATCTTTGCAAAGTTCAAATCATTCCTCACAAAGGGGCATGATCCTTCATGTTTGCGAGAGCTTATGTTGGAAATCCTTGGTAGAGGTTCCCCACATGGAAATGCTGGCTTACAAATACTTGATAGGAACTGGGGTGCTGGTTGGCACCTCTTATCTTTATTACTTGCAACCAAATCTTCTCAAAGGATAAGTTGTTTGGATGCTCTAAAACACCCATTCCTTTGTGGACCAAGATGGCGAGTAGTCCCATCAATGGATATTATAAGATGGGGTCTGGGTTCTACTGCAATGCGTATCAGCGAGGAATATATTTATGGTCAGCCTCAGCGCAGTAGGCTTGCCCACTTCATTGACTTGATGGAGATGTTGAATCCTAATAAAAAGCCAAAGAACTGGCTGGAGCTGCTTCCCGGCAAATGGCGTCTACTGTACTGCACTGGGAAACATGTAGGGCTGACTCTTCGCCAACCTCCTGCCCGCGTACTCATTGGAGACGTGCATTTAACTGTGAAAAGGCCATCGAAGTTGAAATCCAATCTATCATTCACCTCTGACATTGGCTTCTCTGTCATGATTGGTCAGGACTGGCCTCATGACAAAACTGGTAAAAGTGGAACAGTGCAGGTGAGTTCTTCATTTGAAGTAAAAGCTGGTAGAAGGTTATATCTGAAGCAAGACAGTGTCAAAGAGAACTTCTCATTTGGCCCTTCTGCCAATGAGGAGGCTTTAGCTCAGAAATTTACTAGCACTAAATGGAGGAAAATAGTCCCTTTCAAGGAGTTTCCATCGAGTCTTCCCGCTGCTAAGCTTGTATCAAGTGATGTTGATGTCACAATGAGCCTTGATGACCCGTTAAATCGAAGCGTAGAGACGGCTAGAAATGTTCTTCAAGAACTAAGAACACAGATCCCCCCTGAAATATTTGATTTATCAAAGATTGTTTGTGGAACATATGTGGACTCTAGGCTGCTTGTCCTTCGAGGGGTTAATGGGTCAGCTCTCCTATTTACAAGGTCTTTTGTGGATAGAAACAGTTCTAGCTAA	2037	0.4364	MALCRTGPNTIPNSNGLASSARNLSTRLVLPVPLGFTGQLSNLGRRKHRGVVCSSLRKSASASSKESQEEDAPSTLSVCLEEELGHVIRFKMSDFKILNHVSIGLGGRGDELVFEGKVKDSGSPLYSTRVVLRQLSSAQAQRRGKRAIEVLKKLVRRKLLYHSYSMQVHGYISLPESNDSGSFILVHGYHGSFSLRHWLQRSDWLPTLEATLALDEESVRKIGEDTTGGPAVSRQLRLIRILMRDLLIGVNYLHSHGFAHTELRLENVHISPIDRHIKVGILGNAADFHVEGSNSGTMDSMDRRQMMIAFDMRCVGFIMAKMVIRELMEPLIFAKFKSFLTKGHDPSCLRELMLEILGRGSPHGNAGLQILDRNWGAGWHLLSLLLATKSSQRISCLDALKHPFLCGPRWRVVPSMDIIRWGLGSTAMRISEEYIYGQPQRSRLAHFIDLMEMLNPNKKPKNWLELLPGKWRLLYCTGKHVGLTLRQPPARVLIGDVHLTVKRPSKLKSNLSFTSDIGFSVMIGQDWPHDKTGKSGTVQVSSSFEVKAGRRLYLKQDSVKENFSFGPSANEEALAQKFTSTKWRKIVPFKEFPSSLPAAKLVSSDVDVTMSLDDPLNRSVETARNVLQELRTQIPPEIFDLSKIVCGTYVDSRLLVLRGVNGSALLFTRSFVDRNSSS*	679

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lja1g4847	678	ProSiteProfiles	Protein kinase domain profile.	97	405	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lja1g4847	678	Pfam	PAP_fibrillin	440	664	IPR006843	-
	Lja1g4847	678	SMART	serkin_6	95	405	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lja1g4847	678	PANTHER	CELL DIVISION PROTEIN KINASE	65	671	-	-
	Lja1g4847	678	PANTHER	PLASTID-LIPID-ASSOCIATED PROTEIN 14, CHLOROPLASTIC-RELATED	65	671	-	-
	Lja1g4847	678	SUPERFAMILY	Protein kinase-like (PK-like)	88	417	IPR011009	-
	Lja1g4847	678	Gene3D	Transferase(Phosphotransferase) domain 1	231	407	-	-

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	Group-Pl-4	Lja1g4847		PAP_fibrillin	1.1e-06	No_clan

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lja1g4847	-		-	ccaj:109796635	1134.78