Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g4805 ATGGGGTTGTCTTTGAGAGTTGTAGTCTTGTTTGTATTGGCTTTTATGATGTTTTCTCAGGTAGATTTAGCAGAAGGTGGACAGGACAACAGAGTTAGGAGCTACATTAGTTGGGAAGATTTGAAGCATGGAAGGGGACATTCAAAAACTGTTCAAGGTGCAGTGGATATGGTTCCAGATCACAACACACAAAGGGTCAAAATCTATATTTTCCCAGGAGTTTACAGAGAAAAAGTGCTTGTGACAAAAACCAAGTCTTATGTATCATTTATAGGTAAAAGAAATCAAACAGCAAGTGCTGTGATTACTTGGAATAGCAAGTCATCAGATAAAGGTCCAAATGGCCAAGCATTAGGCACTTATGGCTCAGCAACTGTAGCAGTAGAATCAGATTATTTTTGTGCAACTGAGATCACTTTTGAGAACACAGTAGTTACAGCACCTGGTACAAAAGGAATGCAAGCAGTGACACTAAGAGTAGACAGTGATAGAGCCATGTTCTATGGAGTTAAGATTAAGGGAACACAGGACACTCTTTTAGACAGCACAGGAACCCATTACTTCTACAAGTGTCTCATCCAAGGCAAAGTTGATTTCATCTTTGGTAGTGCAAAATCACTATATGAGAACTGTCGTATTGAGTCAATAGCTGAGAACTACGGAGCCATTGCAGCGCATCACAGGGATTCGCCACATGAGGATACAGGTTTTTCTTTTGGGTGTAGCATTGGAGGAAGTGGTGGCAATGTGTACCTTGGGAGAGCATGGGGGGAATACTCAAGAATAATATACTCAAATTGCAACATGGATAATATTATTAATCCTCAAGGATGGTCTGAATGGAATCATCCAGAAAGAAAGAAGACTGCAGTTTTTGGTGAGTATCAGTGTCATGGAAGAGGAGCAGATAGAAGACACAGGGTACCTTGGTCAAAATCATTCAACTATGAAGAAGCTAGGCCCTTTTTGGACAAGAGCTTCATAAATGGAGATCAGTGGCTCAGATTGTAA 1011 0.4055 MGLSLRVVVLFVLAFMMFSQVDLAEGGQDNRVRSYISWEDLKHGRGHSKTVQGAVDMVPDHNTQRVKIYIFPGVYREKVLVTKTKSYVSFIGKRNQTASAVITWNSKSSDKGPNGQALGTYGSATVAVESDYFCATEITFENTVVTAPGTKGMQAVTLRVDSDRAMFYGVKIKGTQDTLLDSTGTHYFYKCLIQGKVDFIFGSAKSLYENCRIESIAENYGAIAAHHRDSPHEDTGFSFGCSIGGSGGNVYLGRAWGEYSRIIYSNCNMDNIINPQGWSEWNHPERKKTAVFGEYQCHGRGADRRHRVPWSKSFNYEEARPFLDKSFINGDQWLRL* 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g4805 336 Pfam Pectinesterase 42 331 IPR000070 GO:0030599|GO:0042545
Lja1g4805 336 SUPERFAMILY Pectin lyase-like 43 334 IPR011050 -
Lja1g4805 336 PANTHER PECTINESTERASE QRT1 42 336 - -
Lja1g4805 336 Gene3D - 41 336 IPR012334 -
Lja1g4805 336 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 42 336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g4805 Lja-Chr1 65432252 65435304 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g4805 5 288 Carbohydrate Esterase AT5G55590 51.376 1.16e-115 336
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g4805 K01051 - gmx:100804220 494.197