Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g4804 ATGGAGGATCATTTCTTATCCTTCCCCATCCTTCTCTGTCTTACCCTCTTAATGGTTATGATCTTAAGCACCATAAAGAGATTCAAAACAACTAACACAACCTCCAATCTTCCTCCAGGGCCATGGAAGCTGCCGATTTTTGGAAGCATACATCACCTCATTGGCTCCCTCCCCCACCGCCGGCTGAAAGAGTTATCCCAAAAATATGGCCCTCTAATGCACCTGCAGCTTGGAGAGACATCAGCCATAGTGGTTTCTTCTCCAGAAATTGCCAAAGAAGTGTTGAAAACTCATGAAATCACATTTGCTCAACGACCTCGCTTTCTCGGTGCAGAAATTGCAGCTTATGGCTGTACTAACATTGTCTTCTCACCATATGGAGAGTATTGGAAGCAGCTAAGAAAACTATGCACAGTGGAGCTGGAGGAAGAGGTATCGCATTTAATGAGATATATATCTATGAACACAGGATCCTGTATCAACCTCACGGATAGAGTTTTATCTATGGCATATAGCATCGTCGCAAGAGCAGCTTTTGGTGATAAATGCAAGGACCAAGAAGCATATGTCTTCTTCATCAAGAAAAGTAAGAGATTGGCTGAAAGTTTCAGTGTTACTAACTTGTTTCCTTCCCAACGTTGGCTACATGTGGTTACTGGAATGATGCATAAGTTGAAGGAAATACATAGAAATAATGATATAGTTCTTGAAAATATCATCAGTGAAGCAACAACAAAGACTGGAGGAGATGGAAGTCTTCTGTTTGTTCTTTCGAATCTGAAAGATCATGGTGCCCCTGAATTTAACTTGACAATCAACAACGTAAAAGCCGTTATTCAGGACATGTTTATAGCTGGAAGTGAGTCATCATCTACTACTTTATGGGCATTCTCAAAAATGCTGAAGAACCCAAGAGTAATGAAAAGGGCTCAATCAGAAGTTAGGAAAGTTTTTGGTAGCAGAGGGTATATTGATGAAATGGCTCCTTTACTAGTACCAAGAGAGTGTGGTGAAACTTGTGAGATTAATGGATACACAATACCAGCGGGAACACAACTATTTGTGAATGCATGGGCAATTGGAAGAGATCCAAAATACTGGAGTGAAGAAGAGAAGTTTTATCCTGAGAGATTCCTGGATTGTCCAATTAACTACAAAGGGTCCAATTTTGAATTTATACCTTTTGGTGCAGGTAAGAGAATATGCCCTGGCATTATATTTGCTCTACCAAGTATTGAGCTTCCTCTAGCACAACTGCTGTACTATTTTGACTGGGAACTTCCATTTGGAACTAGTCATGAAGATTTTGACATGACTGAAGCTTTTGACACTATAGTGAGAAGGAAAAATGATCTAGTTGTGATTCCCATTTCTTACAATCCTGTATCTATTGAATAA 1398 0.3991 MEDHFLSFPILLCLTLLMVMILSTIKRFKTTNTTSNLPPGPWKLPIFGSIHHLIGSLPHRRLKELSQKYGPLMHLQLGETSAIVVSSPEIAKEVLKTHEITFAQRPRFLGAEIAAYGCTNIVFSPYGEYWKQLRKLCTVELEEEVSHLMRYISMNTGSCINLTDRVLSMAYSIVARAAFGDKCKDQEAYVFFIKKSKRLAESFSVTNLFPSQRWLHVVTGMMHKLKEIHRNNDIVLENIISEATTKTGGDGSLLFVLSNLKDHGAPEFNLTINNVKAVIQDMFIAGSESSSTTLWAFSKMLKNPRVMKRAQSEVRKVFGSRGYIDEMAPLLVPRECGETCEINGYTIPAGTQLFVNAWAIGRDPKYWSEEEKFYPERFLDCPINYKGSNFEFIPFGAGKRICPGIIFALPSIELPLAQLLYYFDWELPFGTSHEDFDMTEAFDTIVRRKNDLVVIPISYNPVSIE* 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g4804 465 PANTHER CYTOCHROME P450 FAMILY PROTEIN 15 459 - -
Lja1g4804 465 Pfam Cytochrome P450 327 444 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g4804 465 Pfam Cytochrome P450 38 321 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g4804 465 Gene3D Cytochrome P450 30 455 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g4804 465 PRINTS E-class P450 group I signature 90 111 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g4804 465 PRINTS E-class P450 group I signature 402 425 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g4804 465 PRINTS E-class P450 group I signature 356 380 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g4804 465 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g4804 465 PRINTS E-class P450 group I signature 293 319 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g4804 465 PRINTS E-class P450 group I signature 169 187 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g4804 465 PRINTS E-class P450 group I signature 274 291 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g4804 465 PRINTS E-class P450 group I signature 392 402 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g4804 465 SUPERFAMILY Cytochrome P450 38 455 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g4804 465 PANTHER CYTOCHROME P450 71B11-RELATED 15 459 - -
Lja1g4804 465 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 395 404 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g4804 Lja-Chr1 65420383 65427740 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g4804 10 459 Cytochrome P450 AT3G26300 36.364 2.12e-101 310
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g4804 - K23807 gmx:100779851 538.11