Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g4774 ATGGCAGCTTTTACCTCAGTTAGCCTACAGTACTCATCTACCTCATCTTTACAATCCTTGGTACCTTCTTTAGAAGGTACACGAGAGCCTAACTCATGGGGTGTGAGAGAACGATCATGCAAAACAACTACAGGTCAAAGGTTACACTCACAGAAAATTGCAAGGGGGTTAACAATCCAGAGTGCAGCAACAAAAACAGCTAAGACGCCAGCTGAAGAAGACTGGAAGATTAAGCGAGAATTACTGCTGCAAAAAAGGGTAAGAAGTGTGGATGCCAAGGAAGCTTTCCGCCTTCAGAAAGAAAATAATTTTGTTATTCTTGATGTAAGGCCTGAAGCAGAGTTCAAAGAGGCTCATCCTCCAGATGCTATCAATGTGCAAATATATAGGCTTATAAAAGAGTGGACAGCATGGGACATTGCCAGACGTGCTGCATTTGCATTTTTTGGTATTTTTGCTGGCACGGAAGAGAACCCCGAGTTCATCCAGTCTGTTGAAGCAAAATTAAATAAAAATGCCAAGATAATAGTAGCATGCTCTTCAGGGGGTACAATGAAGCCAACACAAAATCTGCCAGAAGGTCAACAATCAAGGTCTCTTATAGCAGCTTACTTGCTGGTCCTCAACGGTTATACCAATGTCTTCCATCTAGAAGGTGGTCTTTACTCATGGTTTAAAGAGGATCTGCCAAGTGTTTCAGAGGAGTGA 708 0.4237 MAAFTSVSLQYSSTSSLQSLVPSLEGTREPNSWGVRERSCKTTTGQRLHSQKIARGLTIQSAATKTAKTPAEEDWKIKRELLLQKRVRSVDAKEAFRLQKENNFVILDVRPEAEFKEAHPPDAINVQIYRLIKEWTAWDIARRAAFAFFGIFAGTEENPEFIQSVEAKLNKNAKIIVACSSGGTMKPTQNLPEGQQSRSLIAAYLLVLNGYTNVFHLEGGLYSWFKEDLPSVSEE* 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g4774 235 ProSiteProfiles Rhodanese domain profile. 100 233 IPR001763 -
Lja1g4774 235 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 85 230 IPR036873 -
Lja1g4774 235 SMART rhod_4 90 230 IPR001763 -
Lja1g4774 235 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 14, CHLOROPLASTIC 28 235 - -
Lja1g4774 235 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 14, CHLOROPLASTIC-RELATED 28 235 IPR043186 -
Lja1g4774 235 Pfam Rhodanese-like domain 93 225 IPR001763 -
Lja1g4774 235 CDD RHOD 94 224 - -
Lja1g4774 235 Gene3D - 86 234 IPR036873 -
Lja1g4774 235 MobiDBLite consensus disorder prediction 20 40 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g4774 1 230 Sulfurtransferasese or Rhodanese AT4G27700 68.696 7.81e-107 305
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g4774 - - gmx:100788147 378.637
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g4774 1 64498134 64500715 Lja1g4774 1 64498134 64500715 ECH