Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g4772 ATGTTTTTCTCCATGATCTCTTCCATTCTCTTCATCCTCTTCTCCTCTTTTCTAATCCTCCGTTTCTTCCGTAAAACCTCTGCTCTTCAAATCCTTAAACAATGGTGGTTCGCCTTCGAAACCCGCCTCCACGTCCACCAATCCTTCAAAATCCCCCTCCACAACCAAAATTCCCAGGAAAATCAACTCCACCGGAAAATCCTCACATACCTCGACTCTCTCCCTTCCGTTCAGGACGCCGATTTCACCAACCTCTTCTCCGGTCCAAACCCCTCTGACATCTTCCTCCACCTCGACGCCAACCAAACCGTCCACGACACCTTCCTCGGCGCCAAGCTCTCCTGGACTAACCACGCCGGAGATTCCCTAGTGCTCAGAATCAAGAAGAAGGACAAGCGCAGAATTTTCCGGCAGTATTTTCAGCATATTCTATCTGTGGTGGAGGAAATTGAGCAGAGGAAGAATAAAGAGACAAGGCTGTTTTTAAACTCCGGCGCCGGCGAGATCTCACGGTGGCGGTCGGTTCCTTTCACGCATCCGGCGAGCTTCGAGACGGTTGCGATGGACGCGGAGCTGAAGAACAAGGTGAAATCCGATCTGGAACAGTTTGTGAAGTCGAAGCAATACTACCACCGGTTAGGGCGCGTTTGGAAGCGGAGCTACCTTCTCTACGGCGCGTCCGGTACGGGGAAGTCCAGCTTCGTCGCCGCCATGGCGAAGTTTCTGAACTACGATGTGTATGATATCGACGCATCGAAGGTGATCGACGGCGCTGATTGGAAGATGCTGCTGATGCAAACGACGCCGAAGTCGATGATCGTGGTGGAGGATCTCGACCGCCTGATCGCGGCGGGGAAATCAGCAACGGCGGCGACGACGGTGAGTATATCCAGCGTGTTGAATTTCATGGACGGGATTGTTTCATGCTGCGGCGAGGAGCGTTTGATGGTGTTCACGATGAATGGGACTAAAGATGAGGTGGATCAAACGGTTCTCCGGCCAGGGAGGGTTGATGTTCACATACACTTTCCCTTATGTGATTTCTCCACTTTCAAGATCTTGGCAGGTAGTTATTTGGGGCTGAAGGAACACAAGCTGTTCCCTCAGGTGGAGGAGGTTTTGCAAACCGGGGCCCGGCTCAGTCCGGCGGAGGTCGGTGAGATTATGATATCTAACCGAAATTCGCCGAGTCGGGCCCTGAAAACCGTTATAACGGCTTTACAAGTGCAAAACAACGGTATAGCGGGTCAACGGTTGAGCCATAGCGGGTCGGGTCGGGGCTCCGATGACGAGTCGATTCCGGTTATATGTAGGGAAAGTGTTCACACGGTGAGGGAGTTTCGGAAACTGTATGGGCTTCTCCGTTTAGGAAGTAGGAGGAAGGATAAGGAGGATTCCTCCGTCCATTCAGCCTCAGGTCCCATAGAAAGAAGCACCACGGGTTGA 1446 0.5242 MFFSMISSILFILFSSFLILRFFRKTSALQILKQWWFAFETRLHVHQSFKIPLHNQNSQENQLHRKILTYLDSLPSVQDADFTNLFSGPNPSDIFLHLDANQTVHDTFLGAKLSWTNHAGDSLVLRIKKKDKRRIFRQYFQHILSVVEEIEQRKNKETRLFLNSGAGEISRWRSVPFTHPASFETVAMDAELKNKVKSDLEQFVKSKQYYHRLGRVWKRSYLLYGASGTGKSSFVAAMAKFLNYDVYDIDASKVIDGADWKMLLMQTTPKSMIVVEDLDRLIAAGKSATAATTVSISSVLNFMDGIVSCCGEERLMVFTMNGTKDEVDQTVLRPGRVDVHIHFPLCDFSTFKILAGSYLGLKEHKLFPQVEEVLQTGARLSPAEVGEIMISNRNSPSRALKTVITALQVQNNGIAGQRLSHSGSGRGSDDESIPVICRESVHTVREFRKLYGLLRLGSRRKDKEDSSVHSASGPIERSTTG* 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g4772 481 Gene3D - 342 408 - -
Lja1g4772 481 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 145 407 IPR027417 -
Lja1g4772 481 MobiDBLite consensus disorder prediction 461 481 - -
Lja1g4772 481 ProSitePatterns EF-hand calcium-binding domain. 248 260 IPR018247 -
Lja1g4772 481 PANTHER BCS1 AAA-TYPE ATPASE 11 427 - -
Lja1g4772 481 SMART AAA_5 217 347 IPR003593 -
Lja1g4772 481 Gene3D - 173 341 IPR027417 -
Lja1g4772 481 Pfam ATPase family associated with various cellular activities (AAA) 222 345 IPR003959 GO:0005524|GO:0016887
Lja1g4772 481 PANTHER BNAANNG18710D PROTEIN 11 427 - -
Lja1g4772 481 CDD AAA 218 345 - -
Lja1g4772 481 Pfam Domain associated at C-terminal with AAA 30 118 IPR025753 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g4772 Lja-Chr1 64490571 64492609 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g4772 213 343 Calmodulin-binding Proteins AT3G56690 25.532 5.59e-07 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g4772 - K08900 gmx:100797983 717.613
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g4772 1 64490571 64492609 Lja1g4772 1 64490571 64492609 ECH