Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g4769 ATGGCGTCAGATCCGAAAGTTCATCTTTTTGAAGATGTGGTGAAGCACAGCGAGATCAAAGATTGTTGGCTTATCATTGATGGGAAGGTGTATGATGTCACCCCTTTTATGGAGGATCATCCCGGAGGTGATGAAGTTTTGTTATCAGCAACAGGGAAAGATGCAACTAATGATTTTGAAGATGTTGGACACAGTGATTCTGCTAGAGACATGATGGAAAAATACTACATTGGTGAGATTGATCCATCAACTGTCCCATTAAAGCGGACCTACGTTCCTCCTCCGCACACTCAGTACAATCCCGACAAGACCTCTGAATTCGTGATCAAGATTTTGCAGTTCCTGGTCCCTCTCCTGATATTGGGCTTAGCCTTTGCTGTCCGACACTACACCAAGAAAGAAGAGTAG 408 0.4412 MASDPKVHLFEDVVKHSEIKDCWLIIDGKVYDVTPFMEDHPGGDEVLLSATGKDATNDFEDVGHSDSARDMMEKYYIGEIDPSTVPLKRTYVPPPHTQYNPDKTSEFVIKILQFLVPLLILGLAFAVRHYTKKEE* 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g4769 135 PANTHER CYTOCHROME B5-LIKE 1 132 - -
Lja1g4769 135 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 4 93 IPR036400 -
Lja1g4769 135 PANTHER CYTOCHROME B5 1 132 - -
Lja1g4769 135 Gene3D - 1 86 IPR036400 -
Lja1g4769 135 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 36 43 IPR018506 GO:0020037
Lja1g4769 135 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 5 81 IPR001199 -
Lja1g4769 135 Pfam Cytochrome b5-like Heme/Steroid binding domain 11 80 IPR001199 -
Lja1g4769 135 SMART Cyt_b5_2 8 81 IPR001199 -
Lja1g4769 135 PRINTS Cytochrome B5 signature 30 40 IPR001199 -
Lja1g4769 135 PRINTS Cytochrome B5 signature 40 54 IPR001199 -
Lja1g4769 135 PRINTS Cytochrome B5 signature 55 62 IPR001199 -
Lja1g4769 135 PRINTS Cytochrome B5 signature 68 80 IPR001199 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g4769 Lja-Chr1 64412082 64414609 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g4769 1 134 NADPH P450 reductases AT5G53560 76.866 3.16e-75 218
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g4769 K23490 - gmx:100499823 248.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g4769 1 64412082 64414609 Lja1g4769 1 64412082 64414609 ECH