Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g4750 ATGGGACTTGGCAGCGGTGATCATTTGATGAGTTTTCATTTGCACATACCTCACCTCCACCTTCACTTTCATCACCACCACCACCACCATGAGAAGAATAAGGATCAGAAGGACAACATCCCAAAAGGTTGTTTGGCAATCATGGTGGGTCAAGGGGAGGAGCAAGAGAGGTTTGTGATCCCTGTGATCTACATCAACCATCCACTCTTCATGCAGTTGCTGAAAGAGGCTGAAGAAGAATTTGGGTTTGATCAGAAAGGACCTATCACTATACCCTGCCATGTGGAAGAGTTCAGAACCGTTCAAGGCATGATCGACAGGGACAAATCTCAGCACCACCACCACCACCATGCTTGGTGCTTCAAAGTTTGA 372 0.4704 MGLGSGDHLMSFHLHIPHLHLHFHHHHHHHEKNKDQKDNIPKGCLAIMVGQGEEQERFVIPVIYINHPLFMQLLKEAEEEFGFDQKGPITIPCHVEEFRTVQGMIDRDKSQHHHHHHAWCFKV* 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g4750 123 PANTHER SAUR-LIKE AUXIN-RESPONSIVE FAMILY PROTEIN 20 118 - -
Lja1g4750 123 Pfam Auxin responsive protein 32 103 IPR003676 GO:0009733
Lja1g4750 123 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 20 118 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g4750 Lja-Chr1 64085032 64086078 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g4750 39 99 Calmodulin-binding Proteins AT5G20810 57.377 1.15e-18 75.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g4750 K14488 - gmx:100526867 156.377
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g4750 1 64085032 64086078 Lja1g4750 1 64085032 64086078 ECH