Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g4749 ATGGGCCATTGCTGCAGCAAAAACATTGCTGTCAACCACGACAGCGTCGACGCCGATCACGTCGTCAAACCTCCGACGAGCAATCACGCGGCAGCGCCGTCGCCGGCTGCTACTCCTGGACTATCCGTCTCGGTCCCCGGTGATGCGGCGACTCCCGGCAGGTACACTCCGGCGAGCTCGTTCTCTACGAGTCCCTTTACTAGTCCTCTGCCGGCTGGTGTGGCGCCTTCACCGGCGAGGACTCCTGGCAGGAAGTTTAGGTGGCCTCTGCCGCCGCCTTCGCCGGCGAAGCCGATCATGGCTGCGTTGCTGCGGCGGCAGGGGAAGACGAAGCCGAAGGATGGGCCTATACCGGAGGAGCAAGGGGAGGGTGGTGGTGGTGGTGGTGGTGCGGAGGGAGAGAGGTCGCTGGATAAGAGCTTTGGGTATGGGAAGAATTTTGGGGCGAAATTTGAGCTGGGGAAGGAAGTGGGTCGTGGACATTTTGGTCACACTTGCTGGGCCAAAGGGAAGAAGGGTGAGCTCAAGGGACAATCGGTGGCTGTGAAAATCATTTCCAAAGCTAAGATGACTTCGGCAATATCAATTGAAGATGTACGGAGAGAGGTGAAAATGCTGAAGGCCTTATCTGGACATAAGAATTTGGTCAAGTTTTATGATGCATTTGAGGATACCAATAATGTCTACATAGTGATGGAGTTGTGTGAGGGTGGAGAATTGCTGGACAGAATTTTAGATAGGGGTGGAAGATACCCAGAGGATGACGCTAAAGCTATTCTTCTACAAATTCTAAATGTCGTTGCCTTTTGTCATCTTCATGGAGTTGTTCATCGTGATCTAAAACCAGAGAATTTTCTTTTTGTCTCAAAAGAAGCGGATTCCGTGATGAAAGTTATTGATTTCGGTCTATCTGATTTTGTTAGGCCAGATCAACGCCTCAATGATATTGTTGGTAGTGCCTACTATGTTGCACCTGAAGTGCTCCATAGATCTTACAGTGTTGAGGCAGACTTATGGAGTATAGGAGTTATATCGTACATATTATTATGCGGAAGCAGACCATTTTGGGCACGGACTGAATCAGGAATCTTCCGGTCTGTGTTAAGAGCAAACCCTAACTTCGATGATTCCCCTTGGCCATCCATATCACCAGAAGCTAAAGACTTTGTGAAAAGACTTTTGAACAAAGACCACAGGAAAAGGATGACTGCAGCTCAAGCTCTAGCTCACCCATGGTTGAGAAATGAAAAAAATGCTATTCCTTTAGATATTTTGATTTACAAGTTAGTCAAGTCATATGTGCGTGCCTCACCTTTGAAACGCGCAGCATTGAAGGCTCTCTCGAAAGCATTATCTGAAGATGACCTTATCTACCTCAGAGCACAGTTTAGCCACTTGGATCCTAAAGATGGTTGCGTTTCACTTGAGAATTTTAGAGTTGCTCTCATGAAAAATGCTACTGATGCCATGAAGGAATCGAGGGTCCCTGACATTTTAAATCTGATGGAGTCACTCTCCTATAAGAAACTGGATTTCGAAGAGTTTTGCGCTGCTGCGATCAGCGTATACCAGCTGGAAGCTCATCCAGAATGGGATAAAATTGCTGCTACAGCTTTCGCATATTTTGACGAGACCGGAAACCGCGTCATTTCAGTCGAGGAGTTGGCACAGGAAATGAACTTGGGTCCTTCAACTTACTCATTAATGAACGATTGGATCAGAAAATCTGATGGCAAACTCAGCTTGTTCGGATATACAAAGTTTTTGCATGGTGTCACAATTCGTAGTTCAAATTCAAGACACCGCCAGCTACCATGA 1818 0.473 MGHCCSKNIAVNHDSVDADHVVKPPTSNHAAAPSPAATPGLSVSVPGDAATPGRYTPASSFSTSPFTSPLPAGVAPSPARTPGRKFRWPLPPPSPAKPIMAALLRRQGKTKPKDGPIPEEQGEGGGGGGGAEGERSLDKSFGYGKNFGAKFELGKEVGRGHFGHTCWAKGKKGELKGQSVAVKIISKAKMTSAISIEDVRREVKMLKALSGHKNLVKFYDAFEDTNNVYIVMELCEGGELLDRILDRGGRYPEDDAKAILLQILNVVAFCHLHGVVHRDLKPENFLFVSKEADSVMKVIDFGLSDFVRPDQRLNDIVGSAYYVAPEVLHRSYSVEADLWSIGVISYILLCGSRPFWARTESGIFRSVLRANPNFDDSPWPSISPEAKDFVKRLLNKDHRKRMTAAQALAHPWLRNEKNAIPLDILIYKLVKSYVRASPLKRAALKALSKALSEDDLIYLRAQFSHLDPKDGCVSLENFRVALMKNATDAMKESRVPDILNLMESLSYKKLDFEEFCAAAISVYQLEAHPEWDKIAATAFAYFDETGNRVISVEELAQEMNLGPSTYSLMNDWIRKSDGKLSLFGYTKFLHGVTIRSSNSRHRQLP* 606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g4749 605 SMART serkin_6 151 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja1g4749 605 SUPERFAMILY EF-hand 446 591 IPR011992 -
Lja1g4749 605 SUPERFAMILY Protein kinase-like (PK-like) 150 435 IPR011009 -
Lja1g4749 605 PANTHER SERINE/THREONINE-PROTEIN KINASE 55 596 - -
Lja1g4749 605 Gene3D Transferase(Phosphotransferase) domain 1 241 432 - -
Lja1g4749 605 MobiDBLite consensus disorder prediction 20 137 - -
Lja1g4749 605 ProSitePatterns Protein kinases ATP-binding region signature. 157 183 IPR017441 GO:0005524
Lja1g4749 605 Gene3D - 452 520 - -
Lja1g4749 605 ProSiteProfiles Protein kinase domain profile. 151 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja1g4749 605 Pfam Protein kinase domain 151 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja1g4749 605 Gene3D - 433 563 - -
Lja1g4749 605 PANTHER CDPK-RELATED KINASE 3-LIKE ISOFORM X1 55 596 - -
Lja1g4749 605 MobiDBLite consensus disorder prediction 55 70 - -
Lja1g4749 605 CDD STKc_CAMK 150 412 - -
Lja1g4749 605 ProSitePatterns Serine/Threonine protein kinases active-site signature. 275 287 IPR008271 GO:0004672|GO:0006468
Lja1g4749 605 Gene3D Phosphorylase Kinase; domain 1 145 240 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g4749 Lja-Chr1 64073760 64081976 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g4749 65 596 EF-hand Containing Proteins AT3G50530 60.517 0.0 706
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Lja1g4749 Pkinase 1.1e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g4749 - - gmx:100803631 1060.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g4749 1 64073760 64081976 Lja1g4749 1 64073760 64081976 ECH