Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g4745 ATGGGTGAAGAACCATTCTCTAACAACAAGATGACCATGATGCTGCTGCATCAGCATCAAAATCATCACCACCGTCCATTTTCATCACCCTTTGATTCTGTTCATGGTGGTTGTGGTCCCACTTTCTCTTCTTCCTGTGTTCTTTCCCCTGCTCCCATTGAGGGTGCTGTAATAAGACCACCTTTGCAGCAGCCTTTTGAAACCCCCACATTCAAATCCCCAGGTTGTGGAGGAATGGCTACTTTGGGGTTTCCTTTCACAAGTTCTCAATGGAGGGAGCTGCAAAGACAAGCCATGATTTACAAGTACATGATGGCTTCTGTTCCTGTTCCTTCTGATCTCCTCATCTCAACTACTTCACTCATGCCCACCACCTTGGATGGTGGTTTCAACCTGAGGTTGTCAAATGGCACTGATCCGGAGCCAGGAAGGTGCAGGAGAACAGATGGGAAGAAATGGAGATGCTCTAGAGATGTGGCACCTAATCACAAGTACTGTGAGCGCCATATGCATAGAGGTCGTCCCCGTTCAAGAAAGCCTGTGGAAGTTCACACCAACAACACCATGAACAACAATAGTAGCCTTCCAATCAAAAGGGCTCGCCATGATTGCAACCCTTTTTCTTCTGCTGGTGATGTTACAGTTGCTGTTTCTAACAGAAAAAATGGATCTCAGTCTCATTTTCTAGCTAACAGTCAACCATACATTGAAAAGTCTTCCTTTTCTCTTGATAACTTTGGCCTTAAAGCTGCAAACTTTGGCTCCCTGGCTTCTGTTTCTTCAAATAGGGAACCCAGAGGCTTGGAGTGGATGTTGAATGGAGACCCAATTTCTCTGGGTGCTTCTGACTCAGGATGGCACTCTTTGATGCATGACAAAAAAGTTGGTGGTTCCTGCAATAACACTGAGCCTCAGTATCTGAATTCATTTGCACTGTATAGTTCTGGACTGGATCATCATGACAGAAGCCTCCCTCCTTTCCTGAATCCTCTGGTTGTTCCCATGGAGCATCTTCAATCTGAGAAACCAAGGGGATTCATTGATGCTTGGTCCAACACAGAAACAAGGGAAATCAATGCCAACAAGAACTCTACTTCATCAATTGGTAAATTAACCCTTTCATCTCTGGATCTGTCAATGGGAGGTGCTGTGCATGATGAAATGGGAACTATTGGAATGGGGTTAGGCCTAATGGAGCATGATGGAAACACACGCGAAGATACTAAGATCTCTCTCTCAAATTGGCTCAACCCATCACCTTGGGTGGCTTCTTCAACACCTGGGGGTCCACTAGCTGAAGTTCTCAGGCCAAGCACCATCACCAGTGATGCTGCAACTTCCGGTCCATCCTCGCCGGCGGTAACACATGTTGAATCTAGCAGAACAATGGTATCATCTCCATCTGGGGTTCTGCAGAAAGCACTTGCTTCATTTTCTGATAGCAGTAGCAATAGCAGCCCAACTATTGCATCATCAAGGGCTAGTTCTGAGATTACCTTGCTCAAGTTCAATTAA 1515 0.4574 MGEEPFSNNKMTMMLLHQHQNHHHRPFSSPFDSVHGGCGPTFSSSCVLSPAPIEGAVIRPPLQQPFETPTFKSPGCGGMATLGFPFTSSQWRELQRQAMIYKYMMASVPVPSDLLISTTSLMPTTLDGGFNLRLSNGTDPEPGRCRRTDGKKWRCSRDVAPNHKYCERHMHRGRPRSRKPVEVHTNNTMNNNSSLPIKRARHDCNPFSSAGDVTVAVSNRKNGSQSHFLANSQPYIEKSSFSLDNFGLKAANFGSLASVSSNREPRGLEWMLNGDPISLGASDSGWHSLMHDKKVGGSCNNTEPQYLNSFALYSSGLDHHDRSLPPFLNPLVVPMEHLQSEKPRGFIDAWSNTETREINANKNSTSSIGKLTLSSLDLSMGGAVHDEMGTIGMGLGLMEHDGNTREDTKISLSNWLNPSPWVASSTPGGPLAEVLRPSTITSDAATSGPSSPAVTHVESSRTMVSSPSGVLQKALASFSDSSSNSSPTIASSRASSEITLLKFN* 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g4745 504 MobiDBLite consensus disorder prediction 441 496 - -
Lja1g4745 504 Pfam QLQ 85 115 IPR014978 GO:0005524|GO:0005634|GO:0006355
Lja1g4745 504 SMART QLQ_2 84 120 IPR014978 GO:0005524|GO:0005634|GO:0006355
Lja1g4745 504 PANTHER - 36 495 IPR031137 GO:0005634|GO:0006351|GO:0032502
Lja1g4745 504 ProSiteProfiles QLQ domain profile. 85 120 IPR014978 GO:0005524|GO:0005634|GO:0006355
Lja1g4745 504 PANTHER GROWTH-REGULATING FACTOR 7 36 495 - -
Lja1g4745 504 MobiDBLite consensus disorder prediction 182 198 - -
Lja1g4745 504 MobiDBLite consensus disorder prediction 171 198 - -
Lja1g4745 504 Pfam WRC 140 182 IPR014977 -
Lja1g4745 504 ProSiteProfiles WRC domain profile. 139 183 IPR014977 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g4745 Lja-Chr1 64010232 64012929 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g4745 77 474 GRF Transcription Factor Family AT4G37740 33.412 4.04e-39 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Lja1g4745 WRC 5.3e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g4745 - - gmx:100796948 580.096
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g4745 1 64010232 64012929 Lja1g4745 1 64010232 64012929 ECH