Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g4743 ATGATGACTTATATTCAACTTATTTTCGTATGTTTCCTACTACAACATTTTCATGGCATCATATGCAACAATGAAACAGATAGAGATGCCCTTCTTTCTTTCAAGTCCCAAGTGATTGACCCAAATAATGCTCTTTCAGATTGGTTACCAAATTCCAAAAATCACTGCACTTGGTATGGTGTCACTTGCTCCAAAGTTGGTTCAAGAGTCCAATCCCTCACCCTAAAAGGACTTGGCCTCTCTGGTAATCTACCCTCTCACCTCTCCAACCTCACCTATCTTCATTCCCTTGACCTTTCCAACAACAAATTTCATGGCCAAATTCCCTTACAGTTTGGTCATCTCTCACTTCTTAATGTTATTCAACTAGCTTTCAACAATCTCAGTGGCACACTTCCACAACAATTGGGTCTTCTGCATCGTTTAAAAAGTTTGGACTTGTCTGTCAATAATCTTACAGGAAAAATCCCTCAAACATTTGGCAATTTGTTGTCTCTTCAAAATCTTTCCATGGCAAGGAACAGGTTTGTGGGTGAGATTCCAAGTGAATTAGGTAATCTCCAAAATCTTTCCCAGCTTCAACTCTCACAGAATTATTTCACTGGTGAGTTTCCCACTTCTATCTTCAACATTACCTCGCTAAGCTTCTTATCCGTGACACAGAATAGTCTATCAGGCAAGTTACCACAAAATTTGGGACATGCTCTTCCAAATTTAAGGACACTTGCCTTGGCAACCAATAGTTTTGAAGGGGTCATTCCTAGTTCCATGTCCAATGCCTCACGTCTTGAATATATTGATCTTGCTAACAATAAGTTTCATGGCTCCATTCCTCTGCTGTACAACTTGAAAAATCTTACCCACTTGAGTCTTGGGAATAACAGTCTATCTTCGACAACATCGTCGAATTTTCAGTTCTTTGATTCCCTTAGAAACTCCACTCAGTTGAAAATTCTCATGATCAATGATAACCATTTGACTGGGGAACTTCCAGCTTCTATTGCCAATTTATCTAGCAATCTAGAACAATTCTGTGTTGCTGATAATTGGCTAACTGGGAGCATTCCTCAAGGGATGAAGAAACTTCAAAACCTCATCTCCTTGTCTTTGGAAAATAATTATTTCACTGGAGAGCTACCATCAGAACTGGGAGCCCTCAATAAGCTGCAGCAGCTTGTGATGTTCAATAATACATTTTCTGGGGAGATTCCGGATATTTTTGGCAATTTTACAAATCTTTATGAACTTGAATTGGGATATAATAACTTCTCAGGTAGAATTCACCCAAGTATTGGACAATGCAGGAGATTGAATGTTCTCGATCTGATGATGAATAGGCTTGGTGGGACTATACCAGAGGAGATATTTCAGCTTTCTGGTTTAACAATGTTGTACTTAAAAGGAAACTCTTTGCGTGGTTCGCTACCTCCTGAGGTCAACACCATGAAGCAACTTCAGACCATGGTTATTTCCAACAACCAGTTGTCAGGCTATATTCCTATAGAAATAGAGGGTTGCACTAGCTTGAAGACACTTGTGTTGGCAAGAAACAGATTCAGTGGCTCAATTCCAAATGGTCTAGGGGATTTAGCATCTCTTGAGACTTTGGATCTATCATCAAACAATCTCACTGGCCCAATTCCTGAAAATTTTGAAAAGCTTGAGTATATGGTGAGATTAAATTTGTCTTATAACCATTTGGAAGGGGTGGTTCCTATGAAAGGCGTTTTTAAGAACCATAGCCGAGTTGATCTCCGAGGTAACAACAAACTATGTGGCCATGACAATGAAATTGTGAAGAAATTTGGACTATTCCTCTGTGTTGCAGGTAAAGAGAAAAGAAACATTAAACTCCCTATCATACTAGCAGTTACAGGTGCCACTGCTTTGCTCATTTCATTGCTCTATCTACTGTGGATGATAATGTCCCGAAAGAAGAAATATAAGGAGGCGAAAACTAATTTGTCTTCTGCCACTTTCAAAGGGTTACCTCAAAATATATCCTACGCTGATATTCGGCTTGCTACAAGCAATTTTGCAGCTGAAAACTTGATTGGAAAAGGAGGCTTTGGCTCTGTTTATAAAGGTGTGTTCAGCATCAGCACCGGTGAAGAAACCACGACCCTTGCTGTCAAAGTCTTGGACCTGCACCAAAGCAAAGCTTCTCAGAGTTTTAATGCAGAATGTGAAGTTTTGAAAAATATCAGGCATCGAAACCTTGTGAAGGTTATCACTTCTTGTTCCAGCCTTGATTATAAGGGAGAAGACTTTAAGGCCCTTATTATGCAATTCATGCCAAATGGAAACTTGGACATGAATCTATACACAGAAGATTATGAGTCAGGATCATCTCTGACCTTGTTGCAAAGATTAAACATTGCCATTGATGTTGCTTCTGCCATGGACTACTTGCACCATGATTGTGACCCCCCAATAGTTCATTGTGATATGAAACCAGCCAATGTCCTACTAGATGAGAATATGGTGGCCCATGTCGCAGATTTTGGATTGGCGAGGTTTCTTTCTCAAAATCCATCAGAAAAGCATAGTAGCACTTTGGGACTAAAGGGATCAATTGGCTATATTGCTCCAGAATATGGTCTAGGAGGAAAGGCTTCAACTCATGGTGATGTCTACAGCTTTGGGATTCTGCTTCTAGAGATGTTCATAGCCAAAAGACCAACTGATGAGATGTTCAAAGAAGGATTAAGCCTGAATAAGTTTGTCTCTGCCATGCATGAGAATCAAGTGCTGAATATGGTTGATCAAAGGCTAATTAACGAATATGAGCACCCGACACGAAGTTCTAGCACAAGTTACGATAGCAGTGGTGGGTCTATAGACAACAGCTATAACAATGATAACACACATTGGGTGCGCAAAGCTGAGGAGTGCGTAGCTGCTGTGATGAGAGTTGCCTTGTCTTGTGCTACTCATCATCCCAAAGACCGATGGACCATGACAGAGGCCTTAACAAAATTGCACGGGATTAGGCAATCTATGCTGGGTATATGA 3015 0.403 MMTYIQLIFVCFLLQHFHGIICNNETDRDALLSFKSQVIDPNNALSDWLPNSKNHCTWYGVTCSKVGSRVQSLTLKGLGLSGNLPSHLSNLTYLHSLDLSNNKFHGQIPLQFGHLSLLNVIQLAFNNLSGTLPQQLGLLHRLKSLDLSVNNLTGKIPQTFGNLLSLQNLSMARNRFVGEIPSELGNLQNLSQLQLSQNYFTGEFPTSIFNITSLSFLSVTQNSLSGKLPQNLGHALPNLRTLALATNSFEGVIPSSMSNASRLEYIDLANNKFHGSIPLLYNLKNLTHLSLGNNSLSSTTSSNFQFFDSLRNSTQLKILMINDNHLTGELPASIANLSSNLEQFCVADNWLTGSIPQGMKKLQNLISLSLENNYFTGELPSELGALNKLQQLVMFNNTFSGEIPDIFGNFTNLYELELGYNNFSGRIHPSIGQCRRLNVLDLMMNRLGGTIPEEIFQLSGLTMLYLKGNSLRGSLPPEVNTMKQLQTMVISNNQLSGYIPIEIEGCTSLKTLVLARNRFSGSIPNGLGDLASLETLDLSSNNLTGPIPENFEKLEYMVRLNLSYNHLEGVVPMKGVFKNHSRVDLRGNNKLCGHDNEIVKKFGLFLCVAGKEKRNIKLPIILAVTGATALLISLLYLLWMIMSRKKKYKEAKTNLSSATFKGLPQNISYADIRLATSNFAAENLIGKGGFGSVYKGVFSISTGEETTTLAVKVLDLHQSKASQSFNAECEVLKNIRHRNLVKVITSCSSLDYKGEDFKALIMQFMPNGNLDMNLYTEDYESGSSLTLLQRLNIAIDVASAMDYLHHDCDPPIVHCDMKPANVLLDENMVAHVADFGLARFLSQNPSEKHSSTLGLKGSIGYIAPEYGLGGKASTHGDVYSFGILLLEMFIAKRPTDEMFKEGLSLNKFVSAMHENQVLNMVDQRLINEYEHPTRSSSTSYDSSGGSIDNSYNNDNTHWVRKAEECVAAVMRVALSCATHHPKDRWTMTEALTKLHGIRQSMLGI* 1005
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g4743 1004 Gene3D Transferase(Phosphotransferase) domain 1 765 1002 - -
Lja1g4743 1004 Pfam Leucine rich repeat N-terminal domain 25 64 IPR013210 -
Lja1g4743 1004 SUPERFAMILY L domain-like 339 595 - -
Lja1g4743 1004 PRINTS Leucine-rich repeat signature 142 155 - -
Lja1g4743 1004 PRINTS Leucine-rich repeat signature 530 543 - -
Lja1g4743 1004 SMART serkin_6 679 1002 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja1g4743 1004 SMART LRR_sd22_2 313 339 - -
Lja1g4743 1004 SMART LRR_sd22_2 139 171 - -
Lja1g4743 1004 SMART LRR_sd22_2 530 553 - -
Lja1g4743 1004 SMART LRR_sd22_2 283 306 - -
Lja1g4743 1004 PANTHER RECEPTOR-LIKE PROTEIN 55 162 995 - -
Lja1g4743 1004 Pfam Protein tyrosine and serine/threonine kinase 682 901 IPR001245 GO:0004672|GO:0006468
Lja1g4743 1004 ProSiteProfiles Protein kinase domain profile. 679 998 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja1g4743 1004 Pfam Leucine rich repeat 237 296 IPR001611 GO:0005515
Lja1g4743 1004 Pfam Leucine rich repeat 508 567 IPR001611 GO:0005515
Lja1g4743 1004 PANTHER RECEPTOR-LIKE PROTEIN 55 2 88 - -
Lja1g4743 1004 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 80 162 - -
Lja1g4743 1004 Pfam Leucine Rich Repeat 141 163 IPR001611 GO:0005515
Lja1g4743 1004 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 2 88 - -
Lja1g4743 1004 ProSitePatterns Protein kinases ATP-binding region signature. 685 712 IPR017441 GO:0005524
Lja1g4743 1004 ProSitePatterns Serine/Threonine protein kinases active-site signature. 812 824 IPR008271 GO:0004672|GO:0006468
Lja1g4743 1004 PANTHER RECEPTOR-LIKE PROTEIN 55 80 162 - -
Lja1g4743 1004 SMART LRR_typ_2 530 553 IPR003591 -
Lja1g4743 1004 SMART LRR_typ_2 91 114 IPR003591 -
Lja1g4743 1004 SMART LRR_typ_2 236 260 IPR003591 -
Lja1g4743 1004 SMART LRR_typ_2 163 187 IPR003591 -
Lja1g4743 1004 SMART LRR_typ_2 362 386 IPR003591 -
Lja1g4743 1004 SMART LRR_typ_2 283 306 IPR003591 -
Lja1g4743 1004 SMART LRR_typ_2 554 579 IPR003591 -
Lja1g4743 1004 SMART LRR_typ_2 139 162 IPR003591 -
Lja1g4743 1004 SMART LRR_typ_2 410 434 IPR003591 -
Lja1g4743 1004 SMART LRR_typ_2 458 482 IPR003591 -
Lja1g4743 1004 Gene3D Ribonuclease Inhibitor 179 279 IPR032675 -
Lja1g4743 1004 ProSiteProfiles Leucine-rich repeat profile. 532 553 IPR001611 GO:0005515
Lja1g4743 1004 Gene3D Ribonuclease Inhibitor 280 601 IPR032675 -
Lja1g4743 1004 Gene3D Ribonuclease Inhibitor 23 178 IPR032675 -
Lja1g4743 1004 Gene3D Phosphorylase Kinase; domain 1 660 764 - -
Lja1g4743 1004 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 162 995 - -
Lja1g4743 1004 SUPERFAMILY L domain-like 24 310 - -
Lja1g4743 1004 SUPERFAMILY Protein kinase-like (PK-like) 655 994 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g4743 Lja-Chr1 63961455 63964940 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g4743 13 999 Receptor kinase-like Gene Family AT3G47570 40.966 0.0 708
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Lja1g4743 PK_Tyr_Ser-Thr 2.1e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g4743 - - mtr:MTR_3g092390 1419.83