Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g4704 ATGAAATTTAATTGTGCAATCATAGTTTTGGTCATATTTTTGCTGAATCAAAATGCTTATTCTGAGCTGGAAGTTGGTTATTACAGCTACTCATGTGGCATGGCTGAGTTCATTGTAAAAGATGAGGTCAGAAGAAGTGTTACTAAGAATCCTGGAATTGCTGCTGGGCTTGTGAGAATGCATTTTCATGATTGCTTTATTAGAGGGTGTGATGCTTCAGTTCTTCTTGATTCCACTCCCTCAAACACTGCAGAGAAAGACTCTCCTGCCAACAAACCAAGTCTTAGAGGGTTTGAAGTCATTGATAGTGCCAAGGCTAAACTTGAAGCAGTGTGCAAAGGAGTTGTTTCATGTGCTGACATAATTGCATTTGCAGCAAGGGATAGTGTGGAATTAGCTGGAGGGGTTGGCTATGATGTCCCTGCAGGAAGAAGAGATGGGAGAATATCACTAGCTTCAGACACAAGAACAGACCTACCTCCTCCAACTTTCAATGTTAACCAACTCACTCAACTCTTTGCAAAGAAGGGTCTAACACAAGAAGAAATGGTCACCCTCTCTGGAGCACACACCATTGGCCGCTCTCATTGCGCAGCATTCAGTTCCAGATTATACAATTTCAGCAGCACTTCAAGGCAGGATCCAAGTTTGGATCCCTCATATGTATCACTGCTGAAGAGGCAATGTCCACAAGGCAGCACAAACCAGAACTTGGTGGTTCCAATGGACCCTTCTAGCCCTGGAGTTGCAGATGCAGGGTACTACATTGATATCTTGGCAAACAGAGGCCTTTTCACCTCTGACCAGGCCCTCTTGACAAACACTCACACAGCCAGTCAAGTGAATCAAAATGCTAGGGATCCAAATCTGTGGGCAAACAAATTTGCAGATGCAATGGTGAAGATGGGTCAAATTAGTGTCTTAACAGGTAATGCTGGAGAGATTAGAGAAAGTTGCAGGGTGGTTAATAGTTAG 975 0.4359 MKFNCAIIVLVIFLLNQNAYSELEVGYYSYSCGMAEFIVKDEVRRSVTKNPGIAAGLVRMHFHDCFIRGCDASVLLDSTPSNTAEKDSPANKPSLRGFEVIDSAKAKLEAVCKGVVSCADIIAFAARDSVELAGGVGYDVPAGRRDGRISLASDTRTDLPPPTFNVNQLTQLFAKKGLTQEEMVTLSGAHTIGRSHCAAFSSRLYNFSSTSRQDPSLDPSYVSLLKRQCPQGSTNQNLVVPMDPSSPGVADAGYYIDILANRGLFTSDQALLTNTHTASQVNQNARDPNLWANKFADAMVKMGQISVLTGNAGEIRESCRVVNS* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g4704 324 Gene3D - 26 323 - -
Lja1g4704 324 CDD secretory_peroxidase 22 322 IPR033905 GO:0004601|GO:0042744
Lja1g4704 324 PRINTS Haem peroxidase superfamily signature 182 197 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja1g4704 324 PRINTS Haem peroxidase superfamily signature 54 68 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja1g4704 324 PRINTS Haem peroxidase superfamily signature 116 133 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja1g4704 324 PRINTS Haem peroxidase superfamily signature 134 146 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja1g4704 324 PRINTS Haem peroxidase superfamily signature 243 258 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja1g4704 324 PANTHER PEROXIDASE 25-RELATED 9 320 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja1g4704 324 PANTHER PEROXIDASE 9 320 - -
Lja1g4704 324 ProSitePatterns Peroxidases active site signature. 54 65 IPR019794 GO:0004601
Lja1g4704 324 PRINTS Plant peroxidase signature 241 256 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja1g4704 324 PRINTS Plant peroxidase signature 32 51 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja1g4704 324 PRINTS Plant peroxidase signature 115 125 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja1g4704 324 PRINTS Plant peroxidase signature 96 109 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja1g4704 324 PRINTS Plant peroxidase signature 134 149 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja1g4704 324 PRINTS Plant peroxidase signature 56 76 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja1g4704 324 PRINTS Plant peroxidase signature 257 274 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja1g4704 324 PRINTS Plant peroxidase signature 181 193 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja1g4704 324 PRINTS Plant peroxidase signature 297 310 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja1g4704 324 SUPERFAMILY Heme-dependent peroxidases 23 323 IPR010255 GO:0004601|GO:0006979|GO:0020037
Lja1g4704 324 Pfam Peroxidase 39 287 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja1g4704 324 ProSitePatterns Peroxidases proximal heme-ligand signature. 182 192 IPR019793 -
Lja1g4704 324 ProSiteProfiles Plant heme peroxidase family profile. 22 323 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja1g4704 324 Gene3D Peroxidase, domain 2 160 302 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g4704 Lja-Chr1 62190246 62192500 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g4704 21 324 Peroxidase AT1G05260 50.000 2.23e-99 294
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g4704 K00430 - gmx:100779031 564.688
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g4704 1 62190246 62192500 Lja1g4704 1 62190246 62192500 ECH