Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g4693 ATGGAGAGCATCTCTACAGATTTGGCAAAGCATGGTGCAGAGAAACTAATTGACAAGGTAATTACAGAATTACGTTATGTGTGTTGCTACACATGTATTGTTGAGGATTTTGAAAAGGCAAAGAGAAGGTTGGAAGCAGAAAGGAGGAGTGTAGAACAACGTATCCAAGTGGCAAAGGGAAGAGGAGAAGATATTCAAGTCAATGCTTCTTATTGGGAAGAGCAAGCTGATGAACTCATTAAAGAGGACGCCAAAACAAAACTCACATGTTTTCCTAATTGCATAAGGAGATATAGAAGGGGAGGGGAACTTTCGAGTAAGACAGAGGAGATTAAAAATTTGGTGAATGAGGGAAACAAACTTGAAAATGTTGGACTCCCTGCTCGCCTTCCAGGTGTTGAACGTTATTCTTCTCAATATTACATCTCTTTCAAAAGCAGAGAGTCCCAATATAATGAACTTTTGGATGCTCTAAAAGATGACAACAATTATATCATTGGATTGCAAGGGATGGGGGGCGTCGGGAAAACTACATTAGCAAATCATGCGGGCAAAGAACTCAAGAAGTCAAAACAGTTTGACCATGCCATTGTTACTACAGTATCATCTACTCCTAATATAAAAAAGATTCAAGATGATATTGCAGCACCCTTAGGCTTGAAGTGGGAGGATTGTACTGAATCAGAGCGGCCTGGGAAATTGTGGAGCAGGCTAACCAATGGTGAGACCATTCTTCTTATATTGGATGATGTGTGGGACTGGCAACATGTCAACTTTGAAGAAATAGGGATTCCATCTGTTGATAATCTCAAAGGTTGCAAAATTCTAGTAACCACACGTAATGTGCATGTATGCAAAAAATTGGGATGTGAGAGGATAATTCAACTAAATGTCTTATCTAAAGATGATGCATGGATCATGTTCAAAAGGCATGCCAACATAACTGATAGTAGTTCCTCTAAAACATTGCTAAATACGGGACGAGAAATAGCAAAAGAATGCAAAGGATTACCGGTTGCTATTGCAATTATTGCTAGCAGTTTAAAGGGCCAACAACGTCAGGAGGAGTGGGATGCAGCGTTAAAATTCTTGCGGAATCCTTCTGGATCCATGCTCGGTATTGATGAAAATTCAGTTGAAATTTATAAATGTTTCAGGTTTAGTTATGATTACATAAAGGATGAAAAATCCAAGGGATTGTTCCTCTTATTTTCTGTATTCCCAGAAGACAAGCAAGTTCCTAATGAACTTTTTACTAGATTTGGCATAGGAGTAGGCATATTTGGGGAAGTTGGTGGCAAATATGATGATACTCGAAGCCAAGTAGTGTTAGCCACAAATAAACTCATAGATTCTTTTTTACTCTCAAAGGATCACGATGGATTTTTGGCAATGCATGACTTGGTGCGTGAAGCAGCCTTATGGATAGCTAACAAGGAGATTCAAGTAGTGAATATTTCTAACAAGAGTCAAAAGTCGTTGGTTGAGAGTGAGAATAACATTAAGTATTTGTCATGCAAAGGAAAGGGAATAGATGTATTTTCTTGTAGGATTGATGGTTCCAAACTTGAAATTCTAAATATCTTCATTGACTACGAGTATGAAGAAGTTTTCATCCAAGTCCCATTTTCATTCTTTGAAAATATGAAGAGGCTTCGAGTTTTATTTATTTATGGTGACAATTTTTTTTCATTACCACAATCAATTCAATTATTAAAGAATATTCGATCTCTATTCTTTTCTGGATTAAGATTACGGGACATTTCCATTCTTGGAAACCTGCAAAGTCTTGAGACTCTTGAATTCCATGATTGTTGGTTTGATGAATTGCCACCTGGAATTGCAAAAGTGGGCAAAATTAGATTGTTGAGGTTAAAGTCTTGTCACTGTAATAATCCATTTGAAGTGATTGAAAGATGTTCATCGCTAGAAGAATTGTATATTGGTTATATTGATTTCTTATATTACAGTGACATTCTCACAGTCACAGTGCATCATTTAAGAACTCCATTGCAAAGGTACTATATATATGATTCAAGCGCATATGAAGACATGGATGCTTTTCCTTCTCTATCAAAACTAGTGTCTCTATCAGCAAAAGGTCATCGTGTTTTCTCAGAAGAAACAATGAAATACTTTGTTCAAACAGCCGAGGATCTTCGATTGGAAGAAAAGGAATGGAGAAACCTTATACCTGAGATTGTTCCGATAGATGAAGGTATGAATGATCTAGTCAATCTTAATTTAAAATATTTTCCACTACTAGAGTGCCTCATTGACATTGCGAGTATTGATGCTCATGGACAAAATGTCCTCTCTAAGTTGGTTGAACTAACACTAGAGGGTATGGATAAATTAAAAGAACTATGTAATGGTCCTTTTCCCTCTGACTTTCTGAAGAGTTTAGAGAGGCTGGAAATGGATAAATGTGACAATTTGCAATGCACACTACTTAAAGGAAAGCTAAACTTATGTTATCTTAAGACCTTGAAACTGCGGAGTTGCACCACATTGGAATCCCTGTTTCATCTGCCGACTGCTCGAAGCCTATTGTTGATAGAGGAATTGAGGATATATTATTGCGATCAATTGAAAAACATAATATCAAGTGAAAGAAAAAAGGAAGAACGGGGAGGAGAAATAGTCGATTGTGGTAATGTTCACAAGAGTCATGACTCATTGTTTCCAAATTTAAAAATTCTGATTATCATTGGATGTCCCCAATTACAAGTTATACTTCCATTCATTTCTGCTCGTGAGGTTCCACTACTAGAAAATATCCACGTCTCTGAATGTCATGAGTTGAAGTACATATTTAGCCAATACCAGCATGGGCATGAAGGCAGGGATTTGCATCAAGACGTAAAGGATGTCATACTTGGTTCTCTAAAAGAAATGACAATTGGTGATGTGCCAAATTTCATTGATATTTTTTTCCCACCATTTGATCATGCCGCATATTCATCCTTGAAGAGGCCATCTTCCAAAAATGGTTCCCAAACACAGATACATTCAGACTCTATCAAATGGAATATCTTTCCTTTTAAATTTTGGAGCACCACATGTATTAAAACCTCATTGGGATCTAAGAATCAACTAGAAGACTCCTCAATCTCATCGAATGTTGAGGTGTGTAAATCCAATGCACAAAACATTTTGTGCCTTCATGAAAGGGTTGGACAACAAATGATCCTACAATTACAAAATATTTGCTTGTATGAATTGCCTCGGATGATGAATCTTTTTGTCGGTCCTAAAAATTGTTTTATTTTCCAAAATCTTACAAATATAAAAATTGTAAGATGTGAAAAATTGGAAATAATTTTTTCCAATTCTACTTTAAGAAGTCTACCAGAGTTGTGTTATCTACTAGTAGAAGATTGCAGAGAATTAAAGCAGATCATTGAAGATCAGGATGCGGAGGATCGAAAAATATCAAAGACATGCTTTCCAAAACTAAAAACACTCGTTGTCATAAGTTGTAACAAGTTGAAATGTGTATTTCCTGTCTCCTTATGTAAAGAGCTTCCCGAGATACAGATTCTAATTATAGACAGAGCAAATGAGCTTGTGGAAGTATTTGGAGGTGAAGGTGATCGAAATGTTGACATACCAAATCTTATGTTTGTAGTTTTTTACAAACTACCAAGCCTCTACCAAGGGAATCAATTTCACACTGTAAGGAATTGTTTGGTACAAAATTGTCCAAACCTCTCTTTGACTTCAACAATGAGGAGTATCAAAGAACTTGAAGATTATTTTTTTGGAAAGATAATAGGTACACTTTATACTTTATAG 3798 0.3626 MESISTDLAKHGAEKLIDKVITELRYVCCYTCIVEDFEKAKRRLEAERRSVEQRIQVAKGRGEDIQVNASYWEEQADELIKEDAKTKLTCFPNCIRRYRRGGELSSKTEEIKNLVNEGNKLENVGLPARLPGVERYSSQYYISFKSRESQYNELLDALKDDNNYIIGLQGMGGVGKTTLANHAGKELKKSKQFDHAIVTTVSSTPNIKKIQDDIAAPLGLKWEDCTESERPGKLWSRLTNGETILLILDDVWDWQHVNFEEIGIPSVDNLKGCKILVTTRNVHVCKKLGCERIIQLNVLSKDDAWIMFKRHANITDSSSSKTLLNTGREIAKECKGLPVAIAIIASSLKGQQRQEEWDAALKFLRNPSGSMLGIDENSVEIYKCFRFSYDYIKDEKSKGLFLLFSVFPEDKQVPNELFTRFGIGVGIFGEVGGKYDDTRSQVVLATNKLIDSFLLSKDHDGFLAMHDLVREAALWIANKEIQVVNISNKSQKSLVESENNIKYLSCKGKGIDVFSCRIDGSKLEILNIFIDYEYEEVFIQVPFSFFENMKRLRVLFIYGDNFFSLPQSIQLLKNIRSLFFSGLRLRDISILGNLQSLETLEFHDCWFDELPPGIAKVGKIRLLRLKSCHCNNPFEVIERCSSLEELYIGYIDFLYYSDILTVTVHHLRTPLQRYYIYDSSAYEDMDAFPSLSKLVSLSAKGHRVFSEETMKYFVQTAEDLRLEEKEWRNLIPEIVPIDEGMNDLVNLNLKYFPLLECLIDIASIDAHGQNVLSKLVELTLEGMDKLKELCNGPFPSDFLKSLERLEMDKCDNLQCTLLKGKLNLCYLKTLKLRSCTTLESLFHLPTARSLLLIEELRIYYCDQLKNIISSERKKEERGGEIVDCGNVHKSHDSLFPNLKILIIIGCPQLQVILPFISAREVPLLENIHVSECHELKYIFSQYQHGHEGRDLHQDVKDVILGSLKEMTIGDVPNFIDIFFPPFDHAAYSSLKRPSSKNGSQTQIHSDSIKWNIFPFKFWSTTCIKTSLGSKNQLEDSSISSNVEVCKSNAQNILCLHERVGQQMILQLQNICLYELPRMMNLFVGPKNCFIFQNLTNIKIVRCEKLEIIFSNSTLRSLPELCYLLVEDCRELKQIIEDQDAEDRKISKTCFPKLKTLVVISCNKLKCVFPVSLCKELPEIQILIIDRANELVEVFGGEGDRNVDIPNLMFVVFYKLPSLYQGNQFHTVRNCLVQNCPNLSLTSTMRSIKELEDYFFGKIIGTLYTL* 1266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g4693 1265 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 138 402 IPR027417 -
Lja1g4693 1265 Pfam NB-ARC domain 149 390 IPR002182 GO:0043531
Lja1g4693 1265 Gene3D - 132 294 IPR027417 -
Lja1g4693 1265 Gene3D Ribonuclease Inhibitor 464 730 IPR032675 -
Lja1g4693 1265 PANTHER - 1089 1177 - -
Lja1g4693 1265 Gene3D - 298 392 IPR042197 -
Lja1g4693 1265 PANTHER - 92 982 - -
Lja1g4693 1265 Gene3D Ribonuclease Inhibitor 1007 1196 IPR032675 -
Lja1g4693 1265 Gene3D Ribonuclease Inhibitor 772 947 IPR032675 -
Lja1g4693 1265 PRINTS Disease resistance protein signature 797 813 - -
Lja1g4693 1265 PRINTS Disease resistance protein signature 238 252 - -
Lja1g4693 1265 PRINTS Disease resistance protein signature 334 348 - -
Lja1g4693 1265 PRINTS Disease resistance protein signature 165 180 - -
Lja1g4693 1265 SUPERFAMILY L domain-like 462 1156 - -
Lja1g4693 1265 PANTHER AND NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN, PUTATIVE-RELATED 92 982 - -
Lja1g4693 1265 Coils Coil 104 124 - -
Lja1g4693 1265 Coils Coil 34 61 - -
Lja1g4693 1265 PANTHER AND NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN, PUTATIVE-RELATED 1089 1177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g4693 Lja-Chr1 62005230 62009943 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g4693 166 845 WRKY Transcription Factor Family AT5G45050 22.082 1.99e-08 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g4693 - - mtr:MTR_3g062320 1065.83