Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g4672 ATGGAGGAAATGTTTGTGGCAGTGAAACTGGCTTCTTCATTTGCTCTTGTGGGCATTTTGAGCTGGATACTTTATCTGTATGGTGATTTGTGGCAAAAGTCCCAAAGGGTGAGAAGGAAGCTCCAAATGCAGGGTATAAGAGGCCCTCCACCTTCTTTTCTCCATGGGAATCTTCCTGATATGCAGAGGATTCAATCACAGGCCAGCAGCATCAACAAATCTACCACCACCAACAACCATTCTGAGCAGTTTCTAGCACATGACTACTCTGCAACCCTCTTCCCATATTTTGAACACTGGAGGAAACAATACGGTTTAGTATACACTTACTCCACAGGGATGAAGCAACATCTATATGTGAACCATCCTGATCTAGTGAGAGAAATGAACCAGTGTATCACTTTGGGATTGGGTAAGCCTTCTTATATAACAAACAAACTTGCACCCATGCTTGGCAATGGCATTTTGAGAGCCAATGGTGTTAGTTGGGCGCACCAGAGGAAACTTGTTGCAGCTGAGTTCTTCATGGACAAAGTTAAGGGTATGGTGGGCCTAATGATAGAGTCAGCACAGCCACTACTGCAAAAATGGGAGCAAGTTATTGAGGGCCAAGGAGGTGTTACAGCTGAAGTGAAAGTTGATGCAGATTTGAGGGGCTTGTCTGCTGATGTAATTTCAAGGGTTTGTTTTGGCCATTCTTACACCAAGGGAAAGGAAGTTTTCTCAAAGCTTAGAAGCATTCAAAAGATCATGTCCAAACAAGGTGGCTTCCTTTTTGGGCTCGGCAGTTTCCGTGACAAACTAAATTTGTGGACAAAGAAGCAAAGTGAGATAAGCACTTTGGAGAGAGAGATTGAGTCACTGATCTGGGAGTTAGTGGAGAAACGCAAGAGAGAATGCTCAGAGACATCATCAGAAAAGGATCTGATGCAGTTACTGCTGGAATCAGCCATGAGTGATCAAAATCTAGGGAAGGACTTCTCCAAGCAATTCGTTGTGGATAATTGCAAAAACATATACTTTGCAGGGCATGAAACTACTGCTGTTGCAGCTTCTTGGTGTTTGATGCTTCTTGCTTTGCACCCTGAATGGCAAACCCGTATAAGGACTGAGGTTGCTGAACATTGCCCCAACAGCATACCTAATGCAGATTCTCTCCCTCTCTTTAAAACGATGACTATGGTGATTCAAGAGGTGCTACGTTTATATCCAGCGGGAGCCTTTGTGTCAAGGGAGACATATGAAGATATCCAAATTGGAAACCTCAATGTTCCTAAAGGTGTCTGTTTATGGACTTTGATCCCAACATTGCACAGAGACCCTGAAATTTGGGGACCAGATGCCAATGAGTTCAAACCAGAAAGGTTCAGTGAGGGGGTCTCTAAGGCTTGCAAGTTCCCACAAGCGTATGTGCCATTTGGATTGGGCACTCGCTTGTGCTTGGGGAAGAACTTTGCAATGGTTCAATTGAAGGTTGTGTTGGCCCTTATCATCTCCAAGTTCAGCTTCTCTTTGTCTCCTAGTTATAGGCATTCTCCGGCATATAGGATGATTGTGGTACCAGGACATGGTGTGTATATTCTCATTCAGAAGATTTGA 1599 0.4403 MEEMFVAVKLASSFALVGILSWILYLYGDLWQKSQRVRRKLQMQGIRGPPPSFLHGNLPDMQRIQSQASSINKSTTTNNHSEQFLAHDYSATLFPYFEHWRKQYGLVYTYSTGMKQHLYVNHPDLVREMNQCITLGLGKPSYITNKLAPMLGNGILRANGVSWAHQRKLVAAEFFMDKVKGMVGLMIESAQPLLQKWEQVIEGQGGVTAEVKVDADLRGLSADVISRVCFGHSYTKGKEVFSKLRSIQKIMSKQGGFLFGLGSFRDKLNLWTKKQSEISTLEREIESLIWELVEKRKRECSETSSEKDLMQLLLESAMSDQNLGKDFSKQFVVDNCKNIYFAGHETTAVAASWCLMLLALHPEWQTRIRTEVAEHCPNSIPNADSLPLFKTMTMVIQEVLRLYPAGAFVSRETYEDIQIGNLNVPKGVCLWTLIPTLHRDPEIWGPDANEFKPERFSEGVSKACKFPQAYVPFGLGTRLCLGKNFAMVQLKVVLALIISKFSFSLSPSYRHSPAYRMIVVPGHGVYILIQKI* 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g4672 532 Coils Coil 278 298 - -
Lja1g4672 532 PRINTS P450 superfamily signature 480 491 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g4672 532 PRINTS P450 superfamily signature 471 480 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g4672 532 PRINTS P450 superfamily signature 394 405 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g4672 532 PRINTS P450 superfamily signature 342 359 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g4672 532 Gene3D Cytochrome P450 30 532 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g4672 532 PANTHER CYTOCHROME P450 714A1-RELATED 6 527 - -
Lja1g4672 532 Pfam Cytochrome P450 91 513 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g4672 532 SUPERFAMILY Cytochrome P450 88 529 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g4672 532 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 473 482 IPR017972 GO:0005506|GO:0016705
Lja1g4672 532 PRINTS E-class P450 group I signature 220 238 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g4672 532 PRINTS E-class P450 group I signature 101 120 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g4672 532 PRINTS E-class P450 group I signature 470 480 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g4672 532 PRINTS E-class P450 group I signature 351 377 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g4672 532 PRINTS E-class P450 group I signature 331 348 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g4672 532 PRINTS E-class P450 group I signature 480 503 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g4672 532 PANTHER CYTOCHROME P450 FAMILY MEMBER 6 527 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g4672 Lja-Chr1 61404247 61411937 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g4672 125 529 Cytochrome P450 AT5G24900 56.098 1.48e-174 496
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g4672 K20661 - gmx:100815776 926.006