Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g4641 ATGAATACTATGCTTTTCCCTGAAAGTGTCTCTGCCAAGAGAAAACAAGTGATCAGAGAGCTTGTGAAGGGTCGTGAGCATGCTACTCAGCTCAAGTTTCTGCTTCAGAATCTAAATGGGGGGTCTCTCTCAGCTAAGGAAATGGCGGCCAGTGTGCTCAGATCTTTCTCCGTCTCTCTTTCTGTCATTACTTCTGATTCTTTATCTGAAGAAGCTGGTAGTGGTGGTGGTGGTGAGGTTGCTGATCAGAATCATAGTGAAGATGGGTCACTTGTGATGGCGGCGGCGGCTGCTGCTTCCAGCAATATTGGTCCTGAAGATTCAAGTGAGAGCTGCGGGAAGAGAATATTTGTGCAGGCCACAAAGGATCGGAGAGGTTCATACAAAAGAAGGAAGAGTGAGCAGACACGGACCATTGTCTCCCCAACCACTGATGATGATCATTCATGGAGAAAGTACGGACAAAAGGATATCTTGAATTCTCAATTCCCCAGGAGTTACTTCAGGTGCACCCGGAAGCATGATCAAGGTTGCCGGGCAAACAAACAGGTGCAACGGATACAGGAGAATCCTGACATGTACCAAATTACATATATTGGGTTTCACACATGCAAAGACACTCCGATCAAAGCCCCAGAAATGGTCACATTCTCTAATACTTGGGACTCATTCCTTGTGAATTCCCATCCTGACTCAAATGAACATCATGATCCAATTATAAAACTAGAATGTCCCTGCAGTGGTGAAACTCCAAGTGATGTTACTGGCAACAACTTGGATCATAGCCTGTGGTCTGAGTTGAAGGATTTTGAGCTATCCAAACCTTCCAATATTATACCCTCAAGCAGTGCAGTTCATATGGATTTTGGGGTACTTTCTTCTCATTTCAGCACTGACTTCCACTTTGAAGAAAATAATCTGCTCTATTCATCTTCGTAA 939 0.4441 MNTMLFPESVSAKRKQVIRELVKGREHATQLKFLLQNLNGGSLSAKEMAASVLRSFSVSLSVITSDSLSEEAGSGGGGEVADQNHSEDGSLVMAAAAAASSNIGPEDSSESCGKRIFVQATKDRRGSYKRRKSEQTRTIVSPTTDDDHSWRKYGQKDILNSQFPRSYFRCTRKHDQGCRANKQVQRIQENPDMYQITYIGFHTCKDTPIKAPEMVTFSNTWDSFLVNSHPDSNEHHDPIIKLECPCSGETPSDVTGNNLDHSLWSELKDFELSKPSNIIPSSSAVHMDFGVLSSHFSTDFHFEENNLLYSSS* 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g4641 312 Pfam WRKY DNA -binding domain 145 205 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lja1g4641 312 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 7 284 IPR044810 GO:0003700
Lja1g4641 312 SUPERFAMILY WRKY DNA-binding domain 141 205 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lja1g4641 312 SMART WRKY_cls 144 206 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lja1g4641 312 MobiDBLite consensus disorder prediction 123 147 - -
Lja1g4641 312 ProSiteProfiles WRKY domain profile. 145 202 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lja1g4641 312 PANTHER WRKY DNA-BINDING TRANSCRIPTION FACTOR 70 7 284 - -
Lja1g4641 312 Gene3D WRKY domain 128 199 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g4641 Lja-Chr1 61045208 61049377 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g4641 12 238 WRKY Transcription Factor Family AT3G56400 37.179 1.07e-39 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lja1g4641 WRKY 2.1e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g4641 - - gmx:100778162 299.671