Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g4638 ATGACATGGTATCTTGAACATTCTTCTGTAAGCTCAGATGGTAGAAAAGTAAGGCTTCCTGGACAGAGGTTGGTTAGCAACAGGACAGTAAAGTGCTTGACAAATGTGGAGGCATTTTCACTCTCTGCCGCCGACCTTGAAGAAGTCACGATACTTTTCACAAGATTCTTGCGGAGCCCTCAGGTCCAAGGAGCTTTAAGGTATGAATCGCCTTATTGGAGATCCCTTGCCGCAAACCGCATTCAAGTTGCATGGAGATATAGACAGAAACGTCTGAGTCGTGGGAGTGGCGAGGAGTACAGCTCGGCGGTTCATCACACGGAGGAGGAGATGCTGCATTGGGGGCTCCCTCCTGACATGAGTTCGGTTGGGGCTTCGTTTTGTTTGTTTATTTCCCGAAACAAGATGGTCAGAACGAAGAACAAGAGAAGGAAGGAAGAGAATATAGCTGAGGATTGGTGCTTTGCTTGCAAGGATGGAGGGCTCATGAGGGTGTGCGATTATAGATATGGAAACCATTGTCACAAAACAACAGAACAACAATACAAATGCCAGAAATCTCGTATCACACAACTCTTCCGTTCTCCCCCCTTCATCAATCATCACCTTGCCTTGAACCTCGAGGGTGCCTTCGCTACGCGACTCGACGGAGGGTGCTTCCGCGACGCGACAGCGGCACAAACGGCAACTCGGGACAAGGCCAGAATGATGAGGAGGCGTCTTCTTCGCAGATCAAAGTCGAACTAG 747 0.4926 MTWYLEHSSVSSDGRKVRLPGQRLVSNRTVKCLTNVEAFSLSAADLEEVTILFTRFLRSPQVQGALRYESPYWRSLAANRIQVAWRYRQKRLSRGSGEEYSSAVHHTEEEMLHWGLPPDMSSVGASFCLFISRNKMVRTKNKRRKEENIAEDWCFACKDGGLMRVCDYRYGNHCHKTTEQQYKCQKSRITQLFRSPPFINHHLALNLEGAFATRLDGGCFRDATAAQTATRDKARMMRRRLLRRSKSN* 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g4638 248 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 1 96 - -
Lja1g4638 248 PANTHER NUCLEOTIDE GATED CHANNEL PROTEIN, PUTATIVE-RELATED 1 96 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g4638 Lja-Chr1 61005921 61015791 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g4638 17 126 Ion Channels AT2G24610 40.708 5.44e-11 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g4638 K05391 - gmx:100795427 176.407