Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g4628 ATGTCGTTTCCGTCTCACCGGCGATCCCAATCGGAGGTGCATTTCCGGATCCCGGAGGATATGGACCTCGAAATGGGTCCATTCGACGCCCATTTCCAAGATCCGGGTGACCTCTTATCGGAATACATGGATTCCGGATCCAAACTCCAATCTCCGATCAATGCGGAGGACGACGACGGCGCCGGCGCCAAAAACGCCTGGCCTGGTCACCGCCGCAGCAACTCCGCCGATGCTTCTTCTTCCATGTTGTCAGAAGGCATCGAGGCTAAGAAAGCCATGTCCCCTGATAAGCTCGCTGAATTGTGGAACGTTGATCCCAAACGAGCTAAGAGGATTCTGGCTAACCGTCAATCTGCGGCGCGCTCGAAAGAGAGGAAGGCTTGCTATGTGTTGGAGCTTGAGAGAAAAATTCATTCTCTTCAGACTGAAGCAACCACTCTTTCTGCACAGTTGAATCTTTTCCAGAGAGATACAACTGGTCTGAGTTCTGAAAATAATGAGTTGAAGCTTCGGTTACAAGCCATGGAGCAACAAGCTAAGTTATGTGATGCCCTAAATGAAGCACTGAAGAAAGAAGTTGATAGGCTCAAGATGGCTACTGGAGAAGTAGTAACTCATGCTGACTCCTTTACTTTGGGAATGCATCATCTTTCATATTCACAAGCTCCGTTTTCCTTACATCAACCACAACATGGGCGGAGCGAACTTCAGGCTATGCAAATGTCACATTTGCATTCACTCTCATCTGATGTATCTACTCCCCATCATCAGCCTATGTTTGACCTATCCACTCCATATGATATGTCGGAAATGTTGTCAAGTGATTCTATCGGCCAGTTTCAGGGGCTGGACATAGGTCACAGGGTTTCTCATGTTCTGATGCCTGATGGTCGCTCCGTTTCTGTTAATAAAATTGACAATCCCTTTTGA 930 0.4774 MSFPSHRRSQSEVHFRIPEDMDLEMGPFDAHFQDPGDLLSEYMDSGSKLQSPINAEDDDGAGAKNAWPGHRRSNSADASSSMLSEGIEAKKAMSPDKLAELWNVDPKRAKRILANRQSAARSKERKACYVLELERKIHSLQTEATTLSAQLNLFQRDTTGLSSENNELKLRLQAMEQQAKLCDALNEALKKEVDRLKMATGEVVTHADSFTLGMHHLSYSQAPFSLHQPQHGRSELQAMQMSHLHSLSSDVSTPHHQPMFDLSTPYDMSEMLSSDSIGQFQGLDIGHRVSHVLMPDGRSVSVNKIDNPF* 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g4628 309 Coils Coil 158 192 - -
Lja1g4628 309 Coils Coil 130 150 - -
Lja1g4628 309 CDD bZIP_plant_RF2 108 157 IPR044759 GO:0003700|GO:0006355
Lja1g4628 309 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 2 305 - -
Lja1g4628 309 SMART brlzneu 103 167 IPR004827 GO:0003700|GO:0006355
Lja1g4628 309 Pfam bZIP transcription factor 107 165 IPR004827 GO:0003700|GO:0006355
Lja1g4628 309 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 105 168 IPR004827 GO:0003700|GO:0006355
Lja1g4628 309 PANTHER BZIP TRANSCRIPTION FACTOR 18 2 305 - -
Lja1g4628 309 Gene3D - 106 159 - -
Lja1g4628 309 MobiDBLite consensus disorder prediction 26 83 - -
Lja1g4628 309 SUPERFAMILY Leucine zipper domain 107 161 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g4628 Lja-Chr1 60751745 60757167 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g4628 4 285 bZIP Transcription Factor Family AT2G40620 53.292 1.46e-88 267
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lja1g4628 bZIP_1 9.8e-07 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g4628 - - gmx:100807712 378.252