Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g4624 ATGGATCTTGAACCTGGGAAGTGTTGGAACAACTCAAGGAAGGAATCATGGAAGACCATTCTGCTATTAGCATACCAAAGCCTTGGTGTGGTGTATGGAGACTTGAGCATTTCTCCACTGTATGTTTACACAAGCACATTTGCAGAAGATATTGAACATTCAGAGACCAATGAGGAGATCTTTGGTGCCCTTTCTTTTGTTTTCTGGACCCTGACATTGGTGCCGCTGTTCAAATATGTATTTGTGGTTCTTCGAGCTGATGATAATGGAGAGGGCGGTACGTTTGCTCTGTATTCCTTGATTTGTAGGCATGCAAAGGTTAGTCTTCTGCCCAATCGACAGCTTGCGGATGAAGCGCTTTCGACATATAAGATGGAGGAGCCTCGAGAGAAGAACACTTCTAAAGTGAAGATGCTGCTTGAGAAGCATAAGGGCTTGCATACAGCTCTGCTAATTGTGGTTCTTCTTGGCACTTGTATGGTAATTGGGGATGGACTGCTCACTCCAGCCATTTCTGTTTTCTCAGCGGTATCAGGTCTCGAGGTATCTATGTCTCACCACCAGTATGCTGTGATTCCTATTACTTGCTTCATACTGGTGTGTTTGTTTGCACTCCAGCACTATGGGACACATCGGGTGGGGTTCCTTTTTGCACCAGTTGTGCTGATATGGCTATTGTGCATCAGCACACTTGGTTTATATAATATATTCAAATGGAATCCACATGTGTATAAAGCTCTTTCACCATATTATATGTTCAAGTTCTTGAAGAAGACCAGGATAAGTGGGTGGATGTCTTTGGGTGGAATATTACTGTGCATAACAGGCTCAGAAGCTATGTTTGCTGATCTTGGCCATTTCTCATATATGGCAATTCAGCTTGCATTCACCTTTCTGGTATATCCTGCACTTATATTGGCATATATGGGTCAAGCTGCTTACTTGTCGCAACATCATAAATCCGATCTCCAAATCAGTTTCTATGTTTCAGTTCCAGAAAGCGTGAAGTGGCCGGTGCTTATCTTAGCTATTCTAGCTTCTGTTGTGGGAAGCCAAGCAATAATCAGCGGAACATTTTCAATCATAAACCAGAGTCAATCTCTAGGTTGCTTCCCTAGAGTTAAGGTTGTTCATACATCAGACAAGATACATGGCCAGGTCTACATCCCTGAAATTAATTGGATACTCATGATCCTCTGCATTGCTGTCACCATTGGCTTTAGGGACACAAAACACATGGGAAATGCATCAGGGCTAGCAGTGATGACCGTGATGCTAGTGACAACATGCCTTACTTCATTAGTTATTATCATTTGTTGGAACAAACCCCCCATCATAGCTCTATGCTTCCTCTTGTTCTTTGGCTCTGTTGAACTGCTATACTTCTCAGCTTCACTGACAAAGTTTCGTGAGGGTGCCTGGTTCCCTATCCTCCTAGCCCTGGTCCTTATGATCATAATGTTCCTTTGGCACTATGCAACCATCAAGAAATATGAATATGACCTTCACAACAAAGTGTCACTAGAATGGCTTCTAGCTTTAGGTCCAAGCTTGGGAATTGCTAGAGTCCCCGGAATAGGCCTAGTGTTCAGTGATCTCACCACTGGTATCCCCGCAAACTTCTCCCGTTTTGTCACCAACCTCCCCGCGTATCACCGCATCCTTGTTTTCGTGTGTGTGAAATCTGTACCGGTTCCTCATGTCACTGCTGCTGAGAGGTACCTTGTAGGCCGCGTAGGACCTGCTGCGCATCGATCCTACAGGTGCATAGTCAGATACGGATACCGCGATGTTCATCAGGATGTTGATTCCTTTGAAACTGAACTAGTACAAAGACTTACTGAATTCATCCAATATGATTGGTTTCGAACTCGGGGAAGCAACATGAGCATTGAGGATGATGGTTCAAACTCTAATGAGTCATCAAGTCATAGATTAACTGTAATTGGAACAATTGGTTTCTCCAACCAACTAGGATATGGAACTGATCATAGTTTGCAGCCAGCAAGTGTATCTGTTGGATTTTCGACTGTACAAAGTGTGACGGATGTTATCGAGATGGAACCAGTGGGCGCGGCTGAGAGAAGAGTGAGGTTTGCCATTGATGATGATGCTGAAAGTGACACAAGGTCTGAGGTAGGTGTGCAAATGCAGGAAGAGCTTGAGGATCTACATGCTGCTCAGGAATCTGGTATTGCATTCATTCTTGGTCATTCTCATGTGAAAGCAAAGCAAGGTTCATCTGTTCTGAAGAGATTGGCACTTAACTATGGTTACAATTTCTTGAGAAGTAATTGTCGGGGTCCGGATGTGACGCTTAAGGTGCCCCCGGTTTCGCTTTTGGAGGTTGGCATGGTTTATATTGTGTAG 2370 0.4401 MDLEPGKCWNNSRKESWKTILLLAYQSLGVVYGDLSISPLYVYTSTFAEDIEHSETNEEIFGALSFVFWTLTLVPLFKYVFVVLRADDNGEGGTFALYSLICRHAKVSLLPNRQLADEALSTYKMEEPREKNTSKVKMLLEKHKGLHTALLIVVLLGTCMVIGDGLLTPAISVFSAVSGLEVSMSHHQYAVIPITCFILVCLFALQHYGTHRVGFLFAPVVLIWLLCISTLGLYNIFKWNPHVYKALSPYYMFKFLKKTRISGWMSLGGILLCITGSEAMFADLGHFSYMAIQLAFTFLVYPALILAYMGQAAYLSQHHKSDLQISFYVSVPESVKWPVLILAILASVVGSQAIISGTFSIINQSQSLGCFPRVKVVHTSDKIHGQVYIPEINWILMILCIAVTIGFRDTKHMGNASGLAVMTVMLVTTCLTSLVIIICWNKPPIIALCFLLFFGSVELLYFSASLTKFREGAWFPILLALVLMIIMFLWHYATIKKYEYDLHNKVSLEWLLALGPSLGIARVPGIGLVFSDLTTGIPANFSRFVTNLPAYHRILVFVCVKSVPVPHVTAAERYLVGRVGPAAHRSYRCIVRYGYRDVHQDVDSFETELVQRLTEFIQYDWFRTRGSNMSIEDDGSNSNESSSHRLTVIGTIGFSNQLGYGTDHSLQPASVSVGFSTVQSVTDVIEMEPVGAAERRVRFAIDDDAESDTRSEVGVQMQEELEDLHAAQESGIAFILGHSHVKAKQGSSVLKRLALNYGYNFLRSNCRGPDVTLKVPPVSLLEVGMVYIV* 790
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g4624 789 TIGRFAM kup: potassium uptake protein 23 788 IPR003855 GO:0015079|GO:0016020|GO:0071805
Lja1g4624 789 Pfam K+ potassium transporter 25 597 IPR003855 GO:0015079|GO:0016020|GO:0071805
Lja1g4624 789 PANTHER POTASSIUM TRANSPORTER 2 1 789 - -
Lja1g4624 789 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 1 789 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g4624 Lja-Chr1 60708773 60713149 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g4624 1 789 Inorganic Solute Cotransporters AT2G40540 77.861 0.0 1269
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g4624 K03549 - gmx:100783540 1422.53