Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g4602 ATGGCCAATTCTTTTTGTTCTAGATTAACTATCTGTTTTGCTCTCTTTGTCCTCATATTGGGGAGTGCCAATGCTCAACTTTCTACAAACTTCTATTCTAGTTCTTGTCCAAAACTCTTTTCCACTGTGAAATCCTCAGTGCAATCCGCCATATCAAAGGAGGCTCGCATGGGTGCTTCTCTCCTCCGCTTGTTCTTCCATGATTGCTTCGTCAATGGGTGTGATGGTTCAGTTCTACTTGATGACACATCAAGCTTCACCGGGGAGAAGAATGCAAACCCCAACAGAAACTCTGCTCGCGGATTTGATGTTATTGACAACATCAAGTCAGCAGTAGAGGCAGCATGCCCAGGAGTTGTATCCTGCGCTGATATCCTCGCCATCTCTGCTAGAGACTCTGTTGTGAGCCTCGGCGGCCCCACATGGAATGTGAAAGTAGGAAGAAGAGACGCTAAAACTGCTAGCCAGTCCGCCGCCAACACAGGCATCCCTGCACCCACTTCTAGCTTGAGCCAACTCACCTCAAGGTTCAGTGCTCTTGGACTTTCCAGCAAAGACTTGGTTGCATTGTCAGGTGCCCACACAATTGGACAAGCAAGGTGCACGTCCTTCAGGGCACGCATCTACAACGAAACTAGCACAATAGAGAGCTCATTTGCTACATCTAGGAAATCAAATTGTCCCAGCACTTCTGGTTCAGGGGACAACAATTTGGCACCACTTGACCTTCAGACTCCAACCTCCTTTGACAACAACTACTTCAAGAACCTGGTTCAGAACAAGGGCCTCCTACACTCCGACCAGCAACTCTTCAACGGTGGCTCCACCGACTCCACCGTGCGTGGCTACAGCACCAACCCGAGCTCATTTTCCTCTGATTTCGCCAGCGCCATGGTCAAGATGGGAGATATCAGTCCTCTCACTGGATCCAACGGTGAAATCAGGAAGAATTGCAGAAAAACCAACTAA 969 0.4871 MANSFCSRLTICFALFVLILGSANAQLSTNFYSSSCPKLFSTVKSSVQSAISKEARMGASLLRLFFHDCFVNGCDGSVLLDDTSSFTGEKNANPNRNSARGFDVIDNIKSAVEAACPGVVSCADILAISARDSVVSLGGPTWNVKVGRRDAKTASQSAANTGIPAPTSSLSQLTSRFSALGLSSKDLVALSGAHTIGQARCTSFRARIYNETSTIESSFATSRKSNCPSTSGSGDNNLAPLDLQTPTSFDNNYFKNLVQNKGLLHSDQQLFNGGSTDSTVRGYSTNPSSFSSDFASAMVKMGDISPLTGSNGEIRKNCRKTN* 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g4602 322 Gene3D Peroxidase, domain 2 164 301 - -
Lja1g4602 322 PRINTS Haem peroxidase superfamily signature 58 72 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja1g4602 322 PRINTS Haem peroxidase superfamily signature 120 137 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja1g4602 322 PRINTS Haem peroxidase superfamily signature 138 150 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja1g4602 322 PRINTS Haem peroxidase superfamily signature 186 201 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja1g4602 322 PRINTS Haem peroxidase superfamily signature 242 257 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja1g4602 322 ProSitePatterns Peroxidases active site signature. 58 69 IPR019794 GO:0004601
Lja1g4602 322 ProSiteProfiles Plant heme peroxidase family profile. 26 322 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja1g4602 322 MobiDBLite consensus disorder prediction 220 239 - -
Lja1g4602 322 ProSitePatterns Peroxidases proximal heme-ligand signature. 186 196 IPR019793 -
Lja1g4602 322 PRINTS Plant peroxidase signature 36 55 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja1g4602 322 PRINTS Plant peroxidase signature 60 80 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja1g4602 322 PRINTS Plant peroxidase signature 100 113 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja1g4602 322 PRINTS Plant peroxidase signature 119 129 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja1g4602 322 PRINTS Plant peroxidase signature 138 153 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja1g4602 322 PRINTS Plant peroxidase signature 185 197 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja1g4602 322 PRINTS Plant peroxidase signature 240 255 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja1g4602 322 PRINTS Plant peroxidase signature 256 273 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja1g4602 322 PRINTS Plant peroxidase signature 296 309 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja1g4602 322 PANTHER PEROXIDASE 72-RELATED 9 321 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja1g4602 322 Gene3D - 30 322 - -
Lja1g4602 322 PANTHER PEROXIDASE 9 321 - -
Lja1g4602 322 CDD secretory_peroxidase 26 321 IPR033905 GO:0004601|GO:0042744
Lja1g4602 322 Pfam Peroxidase 43 285 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja1g4602 322 SUPERFAMILY Heme-dependent peroxidases 26 322 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g4602 Lja-Chr1 60359941 60363802 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g4602 25 322 Peroxidase AT5G05340 78.859 1.77e-178 494
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g4602 K00430 - gmx:100803637 555.058