Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g4595 ATGTTGTTTGTCTCTGCAGCATCATCCACATTTTCTCCGAATCCGATGAAGAACAAGAATCCCCCTCCCACACTCAACTTGCTGCTGCTACTGTTGCTGCTGTTGCTCCTCTCACCACGGTGCTCCGCCTCCCAACCGGAGCTCCGATCTCTCCTCGAGTTCAAGAAAGGCATAACCTCCGATCCGTCTAACCGAGTTCAGGATTCATGGAACCCTACCTCCCTCAACGACGCCGCTCCCTGCCCTTCCTGGCCGGGAATCCTCTGCGACCAACTCACCGGCAACATCACCGGAATCATCCTCGACGGCTTCGGCCTCGGCGGCGAGCTCAAGTTCCACACTCTCCTCGACCTCAAAATGCTATCCAACCTCAGCCTCGCCGGAAACCACTTCACCGGGAGGCTACCGCCGTCGCTCGGAACGCTCACCTCGCTCCAGCATTTGGATCTCTCCCGGAACAACTTCTACGGACCCATCCCTGCTCGGATCAATGAACTATGGGGGCTTAACTACCTCAATTTGTCGCACAACAGCTTCAAAGGTGGGTTCCCCACTGGTCTCAACAACCTCCAGCAGCTGAGGGTGCTTGATTTGCACTCTAACCTTCTCTGGGCTGACATTGGGGACCTTCTCCCCACGCTGCGCAACTTGGAGCATCTTGATTTGAGTCACAATCGGTTCTTTGGTGGGCTTTCACTTTCCATGGAGAATGTTTCAGCTTTGGCTAACACTGTGCGGTTCTTGAACTTGAGTTACAACAACTTGAATGGCCCTTTCTTCCGGAACGATTCGATGGGGTTGTTTCACAACTTACAGGTTTTGGATATGAGTGATAACTTTTTAACAGGGGAGCTTCCTTCTTTTGCTTCATTGTCTGGACTGAGGAGTCTGCGCCTTGCCCGTAATCTCTTGTTCGGGTCCGTGCCCGAGGAGTTGCTGCAGAGCTCAGTGCCCTTGGAAGAATTGGATCTCAGCGCCAATGGATTCACAGGCTCAATTGCTGTGATCAACTCTACAAGTCTAAGTTTTTTGAATCTTTCATCCAATGGTTTATCAGGCTCTTTGCCAACATCTTTGAGAAGTTGTACAATCATGGACTTGAGCAGGAATATGTTATCCGGTGACATTTCTGTTATACAGAACTGGGAAGCTACATCAGATGTTATTAATCTCAGTTCAAACAAGCTGTCAGGATCCTTGCCTCCTGGTTTAGGGATCTATTCGAAGTTGTCTGCCTTTGACTTAAGTTTAAATGAACTCAGTGGAACCATTCCAAGTGGTTTAGTTACTTCATCATCACTTGCAAGATTAAATCTTTCTGGAAATCAATTTACAGGGCCACTTCAGCTTCAAGGTTCAGGGTCAAGTGAATTACTACTCATGTCTCCTTCTCAGCACATGGAATATCTTGATGTATCTAATAATTCCTTAGAAGGTGTCTTGCCTACTGAAATAGATAAGATGGGTGGGCTCAGACTGCTGAATCTGGCAAGGAATGGCTTTTCTGGAGAGCTTCCAAATGAATTGGGCAAACTAGTTTACTTGGAGTATCTCGATTTGTCTAACAACAAGTTTACCGGACATATTCCTGATAGGCTCTCATCCAGCTTAACTGCATTTAATGTGTCTAATAATGATCTATCTGGTCACGTTCCTAAGAATTTGCAGCACTTCCCTCCTTCGTCCTTTTACCCTGGAAATAAAAAGCTAATGTTGCCAACTAGTCCCCCTGGAGATTCTTCGGTGTCTGATAATATTCCAGTGGTTAGACATAAACGTGGTTCAAAACGTAATATCACGATAGCAATTATTCTTGCCATTGTTGGTGCTGCTGTGATGATTGCTTTTGTTTTATTTGCTTATCGTCGGACACAACAAAAAGGGTTTCATGGAAGAAGTGAGTTCAGTGGTCGAAATACTGGAAGAGATGTCAAGTTAGGAAGGCCTTCCCTCTTCAAGTTCAATGCAAACGTTCCACCCCCAACAACTTCGTTGAGCTTTTCAAATGATCACTTGTTGACTTCCAATTCGAGGTCACTCTCTGGACAGTCAGAGTTTATTACTGAAATTTCTGAGCACAGCGTGCCTCAGGGAATGATAGCAACCAGTTCATCATCTGTAATTCCTAATTTGATGGATAACCCTTCTATGTCATCTGGAAGGAAGTCTTCTCCTGGTTCCCCATTGTCGTCCTCACCCCGTTTTATAGAGTCTTGTGAAAAACCGGTGATGTTGGATGTTTACTCACCTGACCGGCTGGCTGGGGAACTGTTTTTCCTGGATTCTTCACTAGCATTCACTGCAGAGGAATTATCTCGAGCTCCAGCTGAAGTTCTCGGCAGAAGTAGCCATGGCACTTTGTACAAGGCTACTCTGGACAGTGGTCATATGTTAACTGTAAAATGGTTACGGGTGGGATTGGTCAAACATAAAAAGGAATTTGCTAGAGAAGTTAAAAGGATCGGTTCTATGAGGCACGCAAACATTGTCCCTTTACGAGCATACTATTGGGGGCCTAGGGAACAAGAGAGGCTTCTCTTAGCTGACTATGTACATGGGGACAACTTGGCCCTCCATCTCTACGAGACCACACCCCGAAGGTACTCACCACTATCATTCAGCCAGAGAATAAGAGTTGCTGTTGATGTTGCACGATGTCTTCTATACCTTCATGACCGAGGGCTGCCGCATGGAAATCTGAAGCCGACAAACATTCTGTTACCAGGACCTGAATACAGTGCTCGTCTTACCGACTATGGTCTGCACCGGCTCATGACACCAGCAGGAATTGCAGAGCAGATACTAAACCTTGGAGCGCTCGGATACCGTGCTCCGGAACTCGCAACTGCATCCAAACCAGTTCCATCTTTTAAGGCTGATGTCTATGCACTTGGAGTGATCCTAATGGAATTGTTAACGAGAAAAAGCGCAGGTGACATAATATCAGGGCAATCAGGTGCTGTTGATCTCACAGATTGGGTTAGGCTGTGTGAAAGAGAAGGGAGGGTAATGGATTGTATAGACAGAGACATTGCAGGTGGTGAAGAATCCTCCAAAGAGATGGACCAATTGCTTGCAACATCTCTCAGGTGTATCCTCCCTGTACATGAAAGGCCTAACATCAGACAAGTTTTTGACGAGCTCTGTTCTATATCATCAGCTTGA 3165 0.4648 MLFVSAASSTFSPNPMKNKNPPPTLNLLLLLLLLLLLSPRCSASQPELRSLLEFKKGITSDPSNRVQDSWNPTSLNDAAPCPSWPGILCDQLTGNITGIILDGFGLGGELKFHTLLDLKMLSNLSLAGNHFTGRLPPSLGTLTSLQHLDLSRNNFYGPIPARINELWGLNYLNLSHNSFKGGFPTGLNNLQQLRVLDLHSNLLWADIGDLLPTLRNLEHLDLSHNRFFGGLSLSMENVSALANTVRFLNLSYNNLNGPFFRNDSMGLFHNLQVLDMSDNFLTGELPSFASLSGLRSLRLARNLLFGSVPEELLQSSVPLEELDLSANGFTGSIAVINSTSLSFLNLSSNGLSGSLPTSLRSCTIMDLSRNMLSGDISVIQNWEATSDVINLSSNKLSGSLPPGLGIYSKLSAFDLSLNELSGTIPSGLVTSSSLARLNLSGNQFTGPLQLQGSGSSELLLMSPSQHMEYLDVSNNSLEGVLPTEIDKMGGLRLLNLARNGFSGELPNELGKLVYLEYLDLSNNKFTGHIPDRLSSSLTAFNVSNNDLSGHVPKNLQHFPPSSFYPGNKKLMLPTSPPGDSSVSDNIPVVRHKRGSKRNITIAIILAIVGAAVMIAFVLFAYRRTQQKGFHGRSEFSGRNTGRDVKLGRPSLFKFNANVPPPTTSLSFSNDHLLTSNSRSLSGQSEFITEISEHSVPQGMIATSSSSVIPNLMDNPSMSSGRKSSPGSPLSSSPRFIESCEKPVMLDVYSPDRLAGELFFLDSSLAFTAEELSRAPAEVLGRSSHGTLYKATLDSGHMLTVKWLRVGLVKHKKEFAREVKRIGSMRHANIVPLRAYYWGPREQERLLLADYVHGDNLALHLYETTPRRYSPLSFSQRIRVAVDVARCLLYLHDRGLPHGNLKPTNILLPGPEYSARLTDYGLHRLMTPAGIAEQILNLGALGYRAPELATASKPVPSFKADVYALGVILMELLTRKSAGDIISGQSGAVDLTDWVRLCEREGRVMDCIDRDIAGGEESSKEMDQLLATSLRCILPVHERPNIRQVFDELCSISSA* 1055
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g4595 1054 Pfam Leucine rich repeat N-terminal domain 46 90 IPR013210 -
Lja1g4595 1054 ProSiteProfiles Protein kinase domain profile. 773 1054 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja1g4595 1054 SUPERFAMILY Protein kinase-like (PK-like) 776 1048 IPR011009 -
Lja1g4595 1054 Gene3D Phosphorylase Kinase; domain 1 754 850 - -
Lja1g4595 1054 Gene3D Transferase(Phosphotransferase) domain 1 853 1054 - -
Lja1g4595 1054 PANTHER OS07G0626500 PROTEIN 27 1050 - -
Lja1g4595 1054 Pfam Leucine Rich Repeat 270 287 IPR001611 GO:0005515
Lja1g4595 1054 Pfam Leucine Rich Repeat 216 236 IPR001611 GO:0005515
Lja1g4595 1054 Gene3D Ribonuclease Inhibitor 319 580 IPR032675 -
Lja1g4595 1054 PANTHER OS07G0626500 PROTEIN 27 1050 - -
Lja1g4595 1054 SMART LRR_typ_2 142 166 IPR003591 -
Lja1g4595 1054 SMART LRR_typ_2 512 536 IPR003591 -
Lja1g4595 1054 SMART LRR_typ_2 291 315 IPR003591 -
Lja1g4595 1054 SMART LRR_typ_2 214 241 IPR003591 -
Lja1g4595 1054 SMART LRR_typ_2 190 210 IPR003591 -
Lja1g4595 1054 MobiDBLite consensus disorder prediction 711 734 - -
Lja1g4595 1054 ProSiteProfiles Leucine-rich repeat profile. 270 292 IPR001611 GO:0005515
Lja1g4595 1054 SUPERFAMILY L domain-like 389 558 - -
Lja1g4595 1054 Gene3D Ribonuclease Inhibitor 47 208 IPR032675 -
Lja1g4595 1054 Gene3D Ribonuclease Inhibitor 209 317 IPR032675 -
Lja1g4595 1054 Pfam Protein kinase domain 777 1044 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja1g4595 1054 SUPERFAMILY L domain-like 80 377 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g4595 Lja-Chr1 60164104 60169689 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g4595 27 552 Receptor kinase-like Gene Family AT3G56370 34.892 1.84e-60 222
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lja1g4595 Pkinase 2.4e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g4595 - - lja:Lj1g3v1207870.1 1952.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g4595 1 60164104 60169689 Lja1g4595 1 60164104 60169689 ECH