Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g4585 ATGAAGAAGTCACATGTGAAGGCCTTCGTGAAGCTCATCGACTACCAGCACCTCTTGCCGACGCGCTACACCCTCGATGATGACCTCAAGGCTATTGTCTCCACCGACGTGCTTCAGGAAAAGGACAAAAAGATCACTACACTCAAGGAGACCAACAAGTGCTTGGAGGAACGTTTCAAGACCGGATTCAGATGGGTCTCCCCCTAA 207 0.5072 MKKSHVKAFVKLIDYQHLLPTRYTLDDDLKAIVSTDVLQEKDKKITTLKETNKCLEERFKTGFRWVSP* 69
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g4585 68 Gene3D - 1 66 IPR038655 -
Lja1g4585 68 Coils Coil 38 58 - -
Lja1g4585 68 PANTHER 60S RIBOSOMAL PROTEIN L27 2 65 IPR001141 GO:0003735|GO:0005840|GO:0006412
Lja1g4585 68 Pfam Ribosomal L27e protein family 1 62 IPR001141 GO:0003735|GO:0005840|GO:0006412
Lja1g4585 68 PANTHER 60S RIBOSOMAL PROTEIN L27 2 65 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g4585 Lja-Chr1 59982960 59984265 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g4585 2 65 Cytoplasmic Ribosomal Protein Gene Family AT3G22230 64.615 3.99e-24 85.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g4585 K02901 - mnt:21400722 98.9821