Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g4567 ATGTCAACAAGGTCTCAAACTATTGTTAACCACAGCGTGTTTGAAGAGCAAGATCAGATCCATCCACAGATGGGGTTCATTCCTTTCCCTGCAAACATGGCCTTTCCTCCTTATCAATCCTTGAAAACCCTTAATGAAATAGCTCCTTCACTATCATCTGAGGCTGCTTCTACTTCAAGTTTTGCAGAAACCCTGCTCACTACCTCTGTCCAAAAACCAAGAGAAGATCTCATCACTTCTACTTTGGGAGGAGGAGGAGATAATCTGCTTTCCTTGAACAGATCAAGAGTTGATTCATGGGCATGGCGAGAAGTATCTGATTGCTTGATCATGGGTAAAAGAAATGGAGGAGGTGATCCTCATCATCATCATCATCTAGGGGTATCTTCCATGAAGATGAAGAAAATGAAGGCAAGAAGAAAGGTGAGGGAGCCTAGGTTTTGCTTCAAGACTATGAGCGATGTGGATGTGTTGGATGATGGCTACAAGTGGAGGAAGTACGGACAGAAAGTGGTCAAGAACACACAGCACCCAAGAAGCTACTACCGTTGCACTAAAGATAATTGCCGAGTAAAGAAACGCGTGGAGCGCTTGGCTGAGGATCCAAGAATGGTGATAACCACATATGAAGGGAGACATGCGCACTCTCCATCAAATGAACTTGAAGACTCGCAAACTCCATCTCAACTCGCTAACTTCTTGTGGTAG 708 0.4435 MSTRSQTIVNHSVFEEQDQIHPQMGFIPFPANMAFPPYQSLKTLNEIAPSLSSEAASTSSFAETLLTTSVQKPREDLITSTLGGGGDNLLSLNRSRVDSWAWREVSDCLIMGKRNGGGDPHHHHHLGVSSMKMKKMKARRKVREPRFCFKTMSDVDVLDDGYKWRKYGQKVVKNTQHPRSYYRCTKDNCRVKKRVERLAEDPRMVITTYEGRHAHSPSNELEDSQTPSQLANFLW* 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g4567 235 Gene3D WRKY domain 145 211 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lja1g4567 235 ProSiteProfiles WRKY domain profile. 153 218 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lja1g4567 235 SMART WRKY_cls 158 217 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lja1g4567 235 MobiDBLite consensus disorder prediction 114 134 - -
Lja1g4567 235 Pfam WRKY DNA -binding domain 159 215 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lja1g4567 235 PANTHER WRKY TRANSCRIPTION FACTOR 13-RELATED 55 226 - -
Lja1g4567 235 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 55 226 IPR044810 GO:0003700
Lja1g4567 235 SUPERFAMILY WRKY DNA-binding domain 150 217 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g4567 Lja-Chr1 59776229 59779054 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g4567 122 235 WRKY Transcription Factor Family AT4G39410 70.677 1.20e-61 193
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lja1g4567 WRKY 9e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g4567 - - gmx:100127389 339.347
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g4567 1 59776229 59779054 Lja1g4567 1 59776229 59779054 ECH