Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g4544 ATGGGTGAACTAGAGCCATATTTGGCAGTGTTTCTAATACAATTAATATATTCTGGGATAACTTTGTTGTCCAAAGCTGCGTTTAATGGGGGCATGAATCCCTGTGTGTTTGTCTTTTATAGACAACTCGTTGGAACCCTTGTTCTGGTCCCTCTGGCCATAATATGTGAACGAAAAGCAGTGACAGTGCCACTCTCTTTCATGACCTTCTGCAAGATTTTTATCCTTTCATTATTTGGGTACAGTATTATACTAGTATTGCCCTTTGTTTACACATCTGCCATGTTGGCTGGTGCAATTGTTAATTGCCTCCCCGCTTCTACATTCTTCTTTGCTGTGCTACTTAGAATGGAGAAGGTAAATATAAGGACAAAATCTGGAATTGCAAAAATGGGAAGTGTGCTACTGTGTATGGTTGGTGTAGGGACCCTAGCATTTTACAAAGGACCCCAGTTAAGGAATGTACACTATCTCCTATCTGGGCATCACAACAGTGTCAATCAACAACATGAAGATCATCTTTCATCTGACAAAAGATGGATATTGGGTTCTTTACTCTTGTTCTTTGCCGTCATCACCTGGAGTTTGTGGCTTGTAATTCAGGCTCAAATTCTTAAAAGCTACCCTTCAAAACTAATGTTCACGAGCCTTCAAAGCCTATCAAGTGCAATTCAATCATTTGGTGTTGCAATAGCTTTTGAGAGAGATATTCAGCAGTGGAAATTGGGCTGGAACATGAGACTGTTTGCAGTTGTATATAGTGGGACACTGGTGACTGGGGTCGCTTACTACATGCAAGCTTGGGTACTTGAGAAGAGAGGACCAGTTTTCTCAGCAATGTGGAACCCACTAAGTTTTATAATTGTCATAATAGGTTCTATGTTGCTCTTGGGGGAGCCCCTATCATTAGGGAGTGTTCTGGGTGGGGTTTTACTGGTATTAAGCCTGTACAGTGTTCTATGGGCAAAAAACAGAGAAGGAATGACTTATCAGAATTCTTTACCAGTTCAAGCACTTAAAGAATGTGCAGAGGTGAAAACAGAGGCCAGAACTAGCCAACTTCCCCAACCCCTAGTTTTCGCAGTCAATAATTACATCATCATTATGTCGCCTAAAGACTCCTGA 1125 0.4124 MGELEPYLAVFLIQLIYSGITLLSKAAFNGGMNPCVFVFYRQLVGTLVLVPLAIICERKAVTVPLSFMTFCKIFILSLFGYSIILVLPFVYTSAMLAGAIVNCLPASTFFFAVLLRMEKVNIRTKSGIAKMGSVLLCMVGVGTLAFYKGPQLRNVHYLLSGHHNSVNQQHEDHLSSDKRWILGSLLLFFAVITWSLWLVIQAQILKSYPSKLMFTSLQSLSSAIQSFGVAIAFERDIQQWKLGWNMRLFAVVYSGTLVTGVAYYMQAWVLEKRGPVFSAMWNPLSFIIVIIGSMLLLGEPLSLGSVLGGVLLVLSLYSVLWAKNREGMTYQNSLPVQALKECAEVKTEARTSQLPQPLVFAVNNYIIIMSPKDS* 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g4544 374 Pfam EamA-like transporter family 7 129 IPR000620 GO:0016020|GO:0016021
Lja1g4544 374 Pfam EamA-like transporter family 182 320 IPR000620 GO:0016020|GO:0016021
Lja1g4544 374 PANTHER WAT1-RELATED PROTEIN 5 334 IPR030184 GO:0016021|GO:0022857
Lja1g4544 374 SUPERFAMILY Multidrug resistance efflux transporter EmrE 249 325 - -
Lja1g4544 374 PANTHER WAT1-RELATED PROTEIN 5 334 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g4544 Lja-Chr1 59371913 59375511 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g4544 1 253 Nodulin-like Gene Family AT5G64700 49.615 2.43e-67 212
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g4544 - - vun:114162763 422.165