Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g4460 ATGTTTTTGCTTTGTCAACCTGGAACAACTAATGATAAGATGTTATTTGTTATTGATCTTGGTTTTGGGTATGCTGTAATTCCAAACCAGGCATTTCAAATTCATTTGGATTTGATGGACACGCCACAACTCTGGTCTGTCCTGATTACCAAGCTTGTCTTGTCTGCATTTCAATTTGTGAGGATGTATGCAAGGAAGAAAATCCACAAGGATAAGGATGCTGAGGCTACTGAGTTTGAAGAATTGAGGAAAGCTTTCCGGAAGATCCATGTTAGGCTTGTGAGGATGCTTGAGAAGAAGTTTAGTGGAAAGGATGTAATTTTCATTGCCACCTGGAGGATATTGAGGCCACCAAAGAAGGGTTCTACTGTTCATGAAGCAATGCTGGAGGATTTTTTCTTGGAGACTTTTGCAGCATTGTATTGGAAGCTATCTGGCAAAGACACAGAGGCTTAG 456 0.4057 MFLLCQPGTTNDKMLFVIDLGFGYAVIPNQAFQIHLDLMDTPQLWSVLITKLVLSAFQFVRMYARKKIHKDKDAEATEFEELRKAFRKIHVRLVRMLEKKFSGKDVIFIATWRILRPPKKGSTVHEAMLEDFFLETFAALYWKLSGKDTEA* 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g4460 151 PANTHER 40S RIBOSOMAL PROTEIN S7 46 81 IPR000554 GO:0003735|GO:0005840|GO:0006412
Lja1g4460 151 PANTHER 40S RIBOSOMAL PROTEIN S7 46 81 - -
Lja1g4460 151 Pfam Ribosomal protein S7e 82 122 IPR000554 GO:0003735|GO:0005840|GO:0006412
Lja1g4460 151 PANTHER 40S RIBOSOMAL PROTEIN S7 82 123 - -
Lja1g4460 151 PANTHER 40S RIBOSOMAL PROTEIN S7 82 123 IPR000554 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g4460 Lja-Chr1 57997810 58000131 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g4460 82 148 Cytoplasmic Ribosomal Protein Gene Family AT3G02560 46.903 3.13e-23 88.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g4460 K02993 - gmx:100499757 97.0561