Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g4456 ATGAAAAGCCTATGTCTTGGCCTGTTCCTTGGTGCCAGCAGTGTCCCATTTCACAGCAGAAGCTTTTCGGATCATTTAACTAGAAAGAGCATTGGAAAGCAACTTCAATTCCACTCTCATTGTCTTGTTTTCTCTTCATACTCAGGTTCTGCTACTATATCAGCAACTGAAGAAGTAGTAGAGAAGCCTATATTTGATGGACACAAGGCTGCTTTGCTTGTTAAGGATCTTAGGAAGAGCTTTGATTCAGGCAAGACAAAAAGCTATGAATGGAGGATTTCCCAGTTGGAGGGCATAGCTAAGATGCTAGAAGAGCGGGAGAAGGACATTATTGCAGCACTTGATAAGGACCTTTCTAAACCTGGATTTGAAGCATTTCTATCTGAGGTGTCTCAAACAAAATCCTCTTGTAGTGAAGCACTTAAAGAACTGAGTCATTGGATGAAACCTGAAAAGGTAAAAACTTCAATTACAACATATCCATCATCAGCAGAGATTGTGTCAGAACCACTGGGAGTTGTGTTGGTCATCTCAACATGGAACTTTCCTTTCTTATTATCACTTGATCCAGTCATCGGAGCAATTTCGGCGGGTAATGCAGTGGTTCTTAAACCATCAGAAATTGCTCCAGCAACATCATCACTGCTTGCAAATTTGCTCAAAGATTATCTAGACAACTCTGCCATAAGAGTTATTGAAGGGGCTGTTCCTGAAACAACAGCACTCTTGGAGCAGAAGTGGGATAAGATACTGTACACAGGTAGTGCTAGAGTAGGTCGCATTGTCATGGCTGCTGCTGCAAAACATCTTACTCCAGTAATTCTTGAACTTGGAGGAAAGTGCCCAGCTGTTATCGATTCAAATGTCAATTTACTGGTTGCTGCTAGGAGGATAATAGCTGGAAAGTGGGCATGCAATAGTGGACAAGCATGCATTTCTGTTGATTATATCATCACAAAGAAAGAATTTGCACCAACACTTATAAATGCTCTGAAAGAGGAACTGGAGCAATTTTTTGGAAAAGATCCATTGGAATCAAAAGACATGTCACGTATTGTGTCTCCATCCCAATTTGCAAGGCTTGTGAAGCTCTTAGATGAGGATAAGGTATCAGACAAAATTGTTTTAGGAGGTCAGAAGGATGAGAAGCAATTAAAGATTGCTCCAACCATCATATTGGATGCTCCTGACGATTCTATGGTAATGCAAGAGGAGATATTTGGACCAATAATGCCAATTATCACTGTTGACAACATTGAAGATAGCTTCAGCATAATCAAATCAAAGCCAAAACCTCTTGCTGCTTATCTCTTCACAAACAATGAGCAGTTGAAAAAGGATTATGTGGAAAACATATCTTCTGGAGGGATGCTCATAAATGACACTATCTTACATGTTGCAACTCCTGGTCTTCCATTTGGAGGAGTTGAAGAGAGTGGAATGGGGTCTTACCATGGAAAATTCTCCTTTGATGGTTTCAGTCATAAGAAGTCAGTCCTGTATAGAAGTTTTGATGCAGACTCATCCCTGAGGTACCCACCATATACACCTGAAAAGCAAAGATTGTTGAAGGCCCTTATCAGTGGCAATATTGTCCGCATAATTCTTACTTTGATCGGATGGTCCAAAGAATAA 1635 0.4049 MKSLCLGLFLGASSVPFHSRSFSDHLTRKSIGKQLQFHSHCLVFSSYSGSATISATEEVVEKPIFDGHKAALLVKDLRKSFDSGKTKSYEWRISQLEGIAKMLEEREKDIIAALDKDLSKPGFEAFLSEVSQTKSSCSEALKELSHWMKPEKVKTSITTYPSSAEIVSEPLGVVLVISTWNFPFLLSLDPVIGAISAGNAVVLKPSEIAPATSSLLANLLKDYLDNSAIRVIEGAVPETTALLEQKWDKILYTGSARVGRIVMAAAAKHLTPVILELGGKCPAVIDSNVNLLVAARRIIAGKWACNSGQACISVDYIITKKEFAPTLINALKEELEQFFGKDPLESKDMSRIVSPSQFARLVKLLDEDKVSDKIVLGGQKDEKQLKIAPTIILDAPDDSMVMQEEIFGPIMPIITVDNIEDSFSIIKSKPKPLAAYLFTNNEQLKKDYVENISSGGMLINDTILHVATPGLPFGGVEESGMGSYHGKFSFDGFSHKKSVLYRSFDADSSLRYPPYTPEKQRLLKALISGNIVRIILTLIGWSKE* 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g4456 544 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 78 497 IPR016162 GO:0016491
Lja1g4456 544 PANTHER ALDEHYDE DEHYDROGENASE 44 544 IPR012394 GO:0006081
Lja1g4456 544 PIRSF ALDH 50 539 IPR012394 GO:0006081
Lja1g4456 544 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 279 479 IPR016163 GO:0016620
Lja1g4456 544 Pfam Aldehyde dehydrogenase family 71 499 IPR015590 GO:0016491
Lja1g4456 544 SUPERFAMILY ALDH-like 73 515 IPR016161 GO:0016491
Lja1g4456 544 PANTHER ALDEHYDE DEHYDROGENASE FAMILY 3 MEMBER I1, CHLOROPLASTIC 44 544 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g4456 Lja-Chr1 57969767 57974194 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g4456 7 544 Aldehyde Dehydrogenase Gene Family AT4G34240 63.853 0.0 688
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g4456 K00128 - gmx:100800699 885.945
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g4456 1 57969767 57974194 Lja1g4456 1 57969767 57974194 ECH
Lja1g4456 1 57969767 57974194 Lja4g0563 4 4688390 4692806 ECH