Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g4450 ATGCTTTCCCAATTGGTAAAGGAGAATCCTCACGTTTGTTACTATGTTGGTCTCTTGTTGGTGTTTTTATTATTTTGTCAAAAAGCATGGAAGCTTTTGTGCAACAATTACAACTCCTCAGTTGGCATTCCTCCAGGAAGTGGAGGGTTACCCTTTGTAGGAGAGACACTGCAGTTCATGGCTGCAATCAACAGCAGCAAAGGAGTCTATGAATTTGTTAGAGTTCGTCGCCTCCGGTATGGAAATTGCTTCAAGACCAAGCTGTTTGGCGAAACGCACGTTTTCATATCGAACACGGAGTCAGCAAAAGCGATTCTGAACAACGAGGGAGGGAAGTTCTCAAAGAGGTACATAAAATCAATAGCAGAGCTCGTTGGTCCTGATAGCTTGCTATGTGCTTCTCAGCAGTATCACAAACACATTCGAGGGTGTCTCTTCAGTTTGTTCTCAACTGATTCTTTGTCCTCTTTCGTGAAACTGTTTGATGAACTTGTTCTTGAAGCTATGAGTAGCTGGAAATGTGGATCCACTGTGATCATACAAGATGAAGCACTCAAGCTAGCTTGTAAGGCAATGTGCAAGATGTTAATAAGCATGGAGAGTGGCTCTGAGCTAGAGATGATGCAAAAGGAGGTTGGTCATGTGTGTGAAGCAATGCTTGCACTCCCCTTCAGGTTACCCTGGACCAGATTCTACAAAGGACTTCAGGCTCGGAAAAAAATTATGGACATGTTAGAGAAGAATATCAGTGAAAGAAGAAGTGGAATTTCAAGTAGCCATGTAGATTTTCTTCAACAGCTTTTAGCTGAAGATCATGATAATAAGTTAAATAAGGATGAAGTCCCAAGGCTAACAGATACTGAGATCAAAGATAATATCTTAACTATGATTATTGCAGGACAGGACACTACAGCAACTGCAATGGCATGGATGATCAAATTTGTGGATGAGAATGAGGAGGTTCTGAATATGCTTATGAAGGAGCAAATACAAATTGAGAAAAAAGGTCCAAGAAGTACATATCTTACATTGGAGGCTCTTAATGAAATGCCATATGCTTCTAAGGTCATAAAAGAAGCTTTGAGGATGGCATCAATAGTGCAATGGTTGCCTAGAGTATCACTCGAGGACTGTGAGATTAAAGGACTTAAGATCAAGAAAGGGTGGAACATTAATATTGATGCTAGATCAATACATCATGATCCAACAACATACAATTATCCGGATGTGTTCAATCCCTTAAGATTCCATGCCGAGACAAAACAGAACAGCTTCCTTGCTTTTGGGGTGGGAGGAAGGATGTGTATGGGGAAGAACATGGCTAAAACCATGATGTTGGTGTTTCTCCACCGTCTCATCACTAATTACAAGTGGAAGGTGATTGATTCAGATGCAAGTATTAAAAAATGGGCGATTTTTTCTAAACTTCAGAATGGATGTCCAATACGTTTGATATGTATGAAGGAGGACACAAGCAACAAGACTGTGATGGGATATTGA 1500 0.4053 MLSQLVKENPHVCYYVGLLLVFLLFCQKAWKLLCNNYNSSVGIPPGSGGLPFVGETLQFMAAINSSKGVYEFVRVRRLRYGNCFKTKLFGETHVFISNTESAKAILNNEGGKFSKRYIKSIAELVGPDSLLCASQQYHKHIRGCLFSLFSTDSLSSFVKLFDELVLEAMSSWKCGSTVIIQDEALKLACKAMCKMLISMESGSELEMMQKEVGHVCEAMLALPFRLPWTRFYKGLQARKKIMDMLEKNISERRSGISSSHVDFLQQLLAEDHDNKLNKDEVPRLTDTEIKDNILTMIIAGQDTTATAMAWMIKFVDENEEVLNMLMKEQIQIEKKGPRSTYLTLEALNEMPYASKVIKEALRMASIVQWLPRVSLEDCEIKGLKIKKGWNINIDARSIHHDPTTYNYPDVFNPLRFHAETKQNSFLAFGVGGRMCMGKNMAKTMMLVFLHRLITNYKWKVIDSDASIKKWAIFSKLQNGCPIRLICMKEDTSNKTVMGY* 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g4450 499 PRINTS P450 superfamily signature 299 316 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g4450 499 PRINTS P450 superfamily signature 426 435 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g4450 499 PRINTS P450 superfamily signature 435 446 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g4450 499 PRINTS P450 superfamily signature 355 366 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g4450 499 SUPERFAMILY Cytochrome P450 39 484 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g4450 499 Pfam Cytochrome P450 44 464 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g4450 499 PANTHER CYTOCHROME P450 26 20 488 - -
Lja1g4450 499 Gene3D Cytochrome P450 34 486 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g4450 499 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 428 437 IPR017972 GO:0005506|GO:0016705
Lja1g4450 499 PANTHER CYTOCHROME P450, FAMILY 722, SUBFAMILY A, POLYPEPTIDE 1 20 488 - -
Lja1g4450 499 PRINTS E-class P450 group I signature 77 96 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g4450 499 PRINTS E-class P450 group I signature 394 418 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g4450 499 PRINTS E-class P450 group I signature 288 305 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g4450 499 PRINTS E-class P450 group I signature 435 458 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g4450 499 PRINTS E-class P450 group I signature 425 435 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g4450 Lja-Chr1 57873104 57877251 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g4450 11 458 Cytochrome P450 AT1G19630 58.315 0.0 549
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g4450 - - lang:109327951 718.383