Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g4373 ATGGATCCAGACGCATTCACCGCCAGCCTATTCAAGTGGGACCCGCGCACCGTCCTCCCCACCACCGGACCCTTACGCCCCCCACTCCTCGACTACGCGGTGGCTCCACCACCAGCTCCGGCAGCAGTCTACCACCCGGCGCGAGCACCTAGGGAGATTGGAGGCCTGGAGGAGCTCTTCCAAGCCTACGGAATCAGATACTACACGGCGGCGAAGATAGCGGAGCTCGGTTTTACGGTGAGCACGCTTGTGGACATGAAGGACGACGAGCTCGACGACATGATGAACAGCCTCTCCCAGATTTTCCGCTGGGACCTCCTCGTCGGCGAACGCTACGGCATCAAAGCCGCCGTCCGAGCTGAGCGGAGGCGCCTCGACGAGGAGGATATGAAACGCCGCAACCTCCTCTCCACCGACACCACAACCAACGCTCTCGATGCTCTCTCTCAAGAAGGTTTATCGGAGGAGCCGGTGGTGCAACGGGAGAAGGAGGTGGTGGGGAGTGGAGGAGGGAGCACGTGGGAGGTGGCTGTGGTGGCGGAGGAGAGGAGGAAGAAGCAGAGGCGGAGGTCGAGGATGAAGCAGCACGGTGATGACAACGAGGAAGGGGAAGACGAGGAAGGAGAGGATGATGATGAAGGGAACAACAACAGCGGTGGTGGTGGAGGTTGTGAGAGGCAGAGAGAGCACCCGTTTATCGTGACGGAGCCTGGGGAGGTAGCACGTGGCAAGAAGAACGGTCTTGACTACCTGTTTCACCTCTATGAACAGTGTCGTGAGTTTTTGATTCAGGTTCAGGCTATTGCTAAGGACCGTGGTGAAAAATGCCCAACCAAGGTGACAAATCAGGTGTTTAGGTATGCGAAGAAGGCTGGGGCGAGCTATATTAACAAGCCAAAGATGAGGCACTACGTGCACTGCTACGCGTTGCACTGTCTGGATGAGGAGGTGTCGAATGAACTGAGGAGGGGTTTCAAGGAGAGAGGGGAGAACGTAGGCGCGTGGAGGCAAGCGTGTTACAAGCCGCTGGTGGCGATTGCGGCGCGTCAGGGTTGGGACATTGATGCAATTTTCAACGCGCATCCTCGTCTTTCGATATGGTACGTGCCAACCAAGCTCCGCCAGCTGTGTCACGCTGAGAGGAACAGCGCCGCCGCTTCTAGCTCCGTTTCTGTTGGCAGTGCTCACCTTCCTTTCTAA 1200 0.5783 MDPDAFTASLFKWDPRTVLPTTGPLRPPLLDYAVAPPPAPAAVYHPARAPREIGGLEELFQAYGIRYYTAAKIAELGFTVSTLVDMKDDELDDMMNSLSQIFRWDLLVGERYGIKAAVRAERRRLDEEDMKRRNLLSTDTTTNALDALSQEGLSEEPVVQREKEVVGSGGGSTWEVAVVAEERRKKQRRRSRMKQHGDDNEEGEDEEGEDDDEGNNNSGGGGGCERQREHPFIVTEPGEVARGKKNGLDYLFHLYEQCREFLIQVQAIAKDRGEKCPTKVTNQVFRYAKKAGASYINKPKMRHYVHCYALHCLDEEVSNELRRGFKERGENVGAWRQACYKPLVAIAARQGWDIDAIFNAHPRLSIWYVPTKLRQLCHAERNSAAASSSVSVGSAHLPF* 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g4373 399 PANTHER PROTEIN LEAFY 1 399 IPR002910 GO:0003677|GO:0006355
Lja1g4373 399 Gene3D Protein LEAFY 222 391 IPR038276 -
Lja1g4373 399 MobiDBLite consensus disorder prediction 185 228 - -
Lja1g4373 399 Pfam DNA Binding Domain (C-terminal) Leafy/Floricaula 219 385 IPR035209 GO:0003677
Lja1g4373 399 MobiDBLite consensus disorder prediction 200 214 - -
Lja1g4373 399 Pfam Floricaula / Leafy protein SAM domain 52 129 IPR035079 -
Lja1g4373 399 MobiDBLite consensus disorder prediction 136 170 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g4373 1 393 Orphan Transcription Factor Family AT5G61850 64.146 2.18e-161 458
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LFY Lja1g4373 C_LFY_FLO 1.4e-109 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g4373 - - gmx:100798196 613.609
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g4373 1 56536014 56537928 Lja1g4373 1 56536014 56537928 ECH