Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g4354 ATGGCGACGATGATGCAAATTCTCCGCCGCAAGAACCCCTTCACTTTCTCTCCTTCCACCGCACCGCTCCGATTCTCCTCTCAACTTTGCGGATTCTCATCGTCTCCTTCTCCTCCCCCGGAGCCCGAGTCTCACACCTCCTGGCGCAATGCCAATGTTTCCGTCTGGTGGGATCTAGATACCTGCACCGTCCCCGCCGCCGACACCGCCGCCGCGATCCCAACCACAGTCGAGAAAGCTCTGTTGGCCTACGAGGTTGAGGGTCCTCGTTCCATCACCGCCTTCGGCGACCTCTCTCGCCTTCCTGGCACCACCCATGAAGCGCTTTCCACTTCTGGAATCAATTTGACCCACCTCTCCAAGGGTTCCTTCGTCGATATCGATTTTTTCAATTCAATTTCCAAATGGGTTCACGTAAACCCTCCACCTGCACATGTGTTTCTGTTATCTGGTAATCAACAATTTGCTTGCACATTGTCTAGGTTGAGATGCAATTACTACAATGTCTTGCTTGCAACTCCAACCCCTCTTGCCGAGGCGCCGGAGTATCTTGCTGGTGCCGCGACGATGGGGTGGGAGTGGTCTTCATTGCTCAAGGGTGAAGTCCTTGCAACAAAAATGAGAGAAGCTCCTGATATCACTTCTGATCAGTATAGTGAATATGTGATAGACCCTTTTGCAAATGCTAAGATGCTATTTAGGCCTGATCATGAAAGGAGGGCTATAATCATGTTGAAACTTCATGAAAAGAAGATTAGGAAATTGTTGAGATCATATAAAAGGCCTGTGTCGTTCGAAGAACTTCGTCGGAAGTTGATGAAATATGATATTTATTTGCATAAGCTTGGGGATGGGGACTTTGGTGCTTTCCTAGGAAGAGTTGCTAATATTGAAGTTAGCAATGAAGGAGAAGATCCTTATGCATGTTTTAAACCCTCTGAAGATGCCTATGAGTCTGGCAGATCTGAGTTTGAAGAATCTGAAGATGATATAGAGGATTCTGATTCTGATGATTCGGCTGCGGAGGAGTCGAAGTGA 1038 0.4788 MATMMQILRRKNPFTFSPSTAPLRFSSQLCGFSSSPSPPPEPESHTSWRNANVSVWWDLDTCTVPAADTAAAIPTTVEKALLAYEVEGPRSITAFGDLSRLPGTTHEALSTSGINLTHLSKGSFVDIDFFNSISKWVHVNPPPAHVFLLSGNQQFACTLSRLRCNYYNVLLATPTPLAEAPEYLAGAATMGWEWSSLLKGEVLATKMREAPDITSDQYSEYVIDPFANAKMLFRPDHERRAIIMLKLHEKKIRKLLRSYKRPVSFEELRRKLMKYDIYLHKLGDGDFGAFLGRVANIEVSNEGEDPYACFKPSEDAYESGRSEFEESEDDIEDSDSDDSAAEESK* 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g4354 345 CDD PIN_limkain_b1_N_like 52 174 - -
Lja1g4354 345 PANTHER EMB|CAB71880.1 8 334 - -
Lja1g4354 345 MobiDBLite consensus disorder prediction 304 345 - -
Lja1g4354 345 PANTHER LIMKAIN B LKAP 8 334 IPR024768 GO:0005777|GO:0010468|GO:1903231
Lja1g4354 345 MobiDBLite consensus disorder prediction 321 345 - -
Lja1g4354 345 Pfam NYN domain 53 175 IPR021139 GO:0004540
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g4354 Lja-Chr1 56186473 56187873 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g4354 44 200 C2H2 Transcription Factor Family AT5G61190 36.478 3.98e-23 99.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g4354 - - lang:109328441 158.303