Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g4319 ATGGTTTCACTGCAGGAGAAGTTGAAGACGTTTGTGAATCACAGATGGCTGGTGTTTGTGTGTGCCATGTGGGACATGTCATTTGCAGGAACCTCGTACATGTTTGGGAGCATATCACCAGTGATAAAGAGCAGCATGGGTTTCAATCAGAAGCAGGTGGCTTTCTTGAGCGTGGCCAAGGATTTGGGTGACAACGTTGGGCTTCTGGCAGGGTTAATCAGCGAGCAATGGCCCCCTTGGCGAGTTATACTTGTTGGGGTTGTTCAGAATGTTGTTGGTTATGGCATCGTTTGGCTTGTTGTCACACACAGGTTCCCTTCTTTGCCTTTGTGGGCGCTATGCATTTTCATATTTGTGGGACAAAATGGCTGTACCTATTACAACACAGCTGCTCTAGTTTCCTCCGTGCAAAGCTTCCCGGAAAGCAGAGGACCCGTGGTGGGGATATTGAAGGGCTTTGTTGGCTTAAGCGGTGCAATTTGGACTCAAATAATAGCTATGATCAATCTCCCTGATCAGGCATCTCTGATTTTCATTATGGCAGTTGGACCCGCTATGGTTTCTTTCACCCTCATGTTCATCATAAGACCAGTCCATAATTACCAACAATCTAGAGCTTCTGATAGTTCAGGCTTCATGTTTATCTACAGCATTTGCCTTCTCTTGGCTGCTTATCTGATGGGAGTTTTACTGCTACAGAATATGTTGGTTTTGGACCAAAGCATCATCACTTTATTTGCAGTTATTTTGATCATTTTCATATTGCTTCCAATTATTGTTCCCATTATATTGGTTTTCTTCTCGGAACCGAAAAGTCCTGACGAGGAAACCCTTCTCGAGCCACCAATCCCAACATCAAGTAAAACTATTCATGTGATTGCTGAGACTAGTAATGGTGCCAAACATGTTGAAGAAGAGAAGCCTCCAAAGCTTGAGGTGCTTCCATTATCAGAAGGGCCAAGGGACATTGTTCAAGTTCATGCCAAACTTTTCCAAGCAGTCACTGCAGCTCTGAAGAAAATCAAACAAAAGAATGGCCCCCGTAGAGGAGAGGATTTCACCTTAACTCAGGCTTTTGCGAAGGCTGATTTTTGGATCATGTTCTTATCCCTCCTGTTGGGTTGTGGATCAGGCTTGACAATGATAAACAACATGGGACAGATTTGTCAATCGTTGGGAGATCACAATGTCAATGTGTATGTATCTATTATTAGCATATCGAACTTCCTCGGTCGTGTTGGTGGCGGCTTCTTCTCAGAGGTTATAGTAAGAAATTTTGCGTACCCGAGACTTGCTGCCTTAGCATTGGTTCAGGCACTGATGTCTTTTGGGCTTTGCTACTATGTCTTTGGCTTGGTTGGACAAGTTTATGTGGTGGCTATATCTATGGGTTTTGGGTATGGTGCCCACTGGTCAATTGCATTAGCTGCAACTTCAGAAGTGTTTGGATTGAAGAACTTTGGAACTTTGTACAACTTTCTTACCATGGCTAGCCCTGCTGGATCTCTGCTTATATCTGCATTGTCCAGCACAATCTATGACTATTATGCAGAGCAACAAGCAAAGCATCGAATTCATACCTATGGAGCCTTGAGGAACTTTGCCATGCCTTATAACAGTACTGGAAATAATGAATTGCTTCTTTGTGAGGGAAACATATGTTATTCCATTACATGTGGAATCTTAGCAGTAGTTTGCCTGTTTGCAGCTGCTTTGAGCTTGATCATAGTTCACCGGACTAAGAGGTTCTATGCTCAACTTTATGTGAAGTGTCAATCTTGA 1782 0.4338 MVSLQEKLKTFVNHRWLVFVCAMWDMSFAGTSYMFGSISPVIKSSMGFNQKQVAFLSVAKDLGDNVGLLAGLISEQWPPWRVILVGVVQNVVGYGIVWLVVTHRFPSLPLWALCIFIFVGQNGCTYYNTAALVSSVQSFPESRGPVVGILKGFVGLSGAIWTQIIAMINLPDQASLIFIMAVGPAMVSFTLMFIIRPVHNYQQSRASDSSGFMFIYSICLLLAAYLMGVLLLQNMLVLDQSIITLFAVILIIFILLPIIVPIILVFFSEPKSPDEETLLEPPIPTSSKTIHVIAETSNGAKHVEEEKPPKLEVLPLSEGPRDIVQVHAKLFQAVTAALKKIKQKNGPRRGEDFTLTQAFAKADFWIMFLSLLLGCGSGLTMINNMGQICQSLGDHNVNVYVSIISISNFLGRVGGGFFSEVIVRNFAYPRLAALALVQALMSFGLCYYVFGLVGQVYVVAISMGFGYGAHWSIALAATSEVFGLKNFGTLYNFLTMASPAGSLLISALSSTIYDYYAEQQAKHRIHTYGALRNFAMPYNSTGNNELLLCEGNICYSITCGILAVVCLFAAALSLIIVHRTKRFYAQLYVKCQS* 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g4319 593 Gene3D MFS general substrate transporter like domains 430 584 IPR036259 -
Lja1g4319 593 SUPERFAMILY MFS general substrate transporter 205 582 IPR036259 -
Lja1g4319 593 Gene3D MFS general substrate transporter like domains 11 205 IPR036259 -
Lja1g4319 593 CDD MFS_Mch1p_like 14 570 - -
Lja1g4319 593 Pfam Nodulin-like 15 262 IPR010658 -
Lja1g4319 593 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 3 592 - -
Lja1g4319 593 SUPERFAMILY MFS general substrate transporter 10 197 IPR036259 -
Lja1g4319 593 PANTHER NODULIN-LIKE/MFS TRANSPORTER 3 592 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g4319 Lja-Chr1 55717652 55720922 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g4319 3 593 Nodulin-like Gene Family AT5G14120 51.182 0.0 583
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g4319 - - gmx:100784744 850.121