Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g4318 ATGGAGGGTAATAGAGATACTGCCTTAATGGTTAAAGAGATTGCAGAGAAGAAGCTATTACAGAAAGACCTTGGTGGCGCAAGGTTATTCGCAAGGAGGGCTCATGACTTCTATCCTGAACTTGATGGCCTCCCTCAATTGCTAGCAACTATTGAAGTTCATATCGCTGGTGAAAATAAAGTTAATGGAGGAGAAGTAGATTGGTACAGGGTCCTCGGTTTGCAACCCTTTGCTGATGATGAAACGATTCGAAAACGTTATAGGAAACTAGCTCTTGCTTTGCACCCTGATAAAAATAAATCTGTAGGAGCGGATGGGGCATTTAATCTTATTTCACAGGCTTGGAGTTTATTATCTGATAAAGCCAAGAGAGCTGCCTATGACAGCAATTACCGCTTATGGAGTATACATCGAGGAATTCCAGGTGGGAAACCTGCTATACCCACTAGTCGGAATAATGGTTTCTATAATACCTTCAATACTGATGACGGGAAAGCCAGAGATCAACGGAGTGTTGCTCATCCCAATCCTGCACCGGGACCTCCTGCAACATCAGACCAGACATTTTGGACCAAATGCAGTTCCTGCCGTTTGCACTGTGAGTACCCTGCTGTTTATAAAAACAGCTATCTCATCTGCGTCAAGTGCAAAAAGCCATTTTTAGCTTCTGAGGTACAACCGCCACCAGCATTCGTAAAGGTTTCATCCACTTCAAGCATTTCTCAAATGCAGCAACAAAATTTCAACTCAACCAGAATGGAAAGAGGCTCTCATACATCAGCTTCTACTGCTTCTGAAGCCCCTGGAGTTTTCAGGATGTCATCTGAAAATTTGAAGAGAAGGCGTGAAGACTCAACACCTGTCATGTGGGAGGAGGTGCATTTAGGAAAACCTTATGCAGTTGAGAGAACTGTTGCTGGTTCAGCTTTTCAGTCCTCTTTTAATGGTTCAAATCCTGTTCTGAAAGGAGATGGGCCTATGAAAAAATGCTGCACTGATGAACTACATAAATTTGATAGTGATAGAAGTGGTATGGAAGCTAAAGTAGCATTTCAGAAAGCAACAGGCTTGGCTAATGAGTTTGGGTCTCAGAAGAATGGCTTTTATACACGAAAAGTTAATGCTGCTGGAAATCACAAACCTAATGGTATTAGGGATGGATCACAGCAAATGAAGAGCATGCTAATGGTAAAGGCTCGGAACGTGATTCGTAAACAGCTAGATGAGTGGAGAGCTTCTTCTGTATCAAAGAATTTAAACAAGCCAAATAATACTGATACAGAAGTCAGAGAGAAGAACAAAGATAGGGCCATCAATGGTATGAAGCCTCCAGCAAAAGAATTTGTTGATTCTGAGACCCTTGGCAAAAAATGTCTTTCTACTGATTCAGAGTTGCCTCCTTCTGTCTCCTTTACTGTTCCAGACCCAGATTTCCATGATTTTGATGGGGACCGTATTGAAGACTCTTTTGGTGAGAACCAGGTATGGGCTATATATGACGAAGACGATGGCATGCCGCGCTACTATGCCTTAATCCACAGTGTAATCTCAAAGAATCCTTTCCAAATGAAGATTAGCTGGCTGAGTTGTAAAACCAATGATGAATTTGCTCCAATAAATTGGATCAGTTCTGGCTTTCCAAAGACCACTGGGGATTTCCGACCAGGTAAGCGTGACATCTATAGCACTCTCAATTCCTTCTCGCACATGGTTAAGTGGACAAAAGGTTCAAGAGGGGCTGTCCATATATATCCGAAGAAAGGGGATGTTTGGGCTCTGTATCGGAACTGGTCCGCTGATTGGAATGAGCTCACTAAAGATGAAATCATACATGAATATGACATGGTGGAAGTGCTTGAAGACTACAGTGAAGAGAAAGGTGTGAATGTTGCTCCACTTCTCAAGGTTGCAGGTTTCAAGACAGTATTCCGCCAGAATGCTGATCCAAGAAAAATCAGGAACATTCCGAAGGAAGAAATGTTTCGTTTCTCACACCAGGTGCCTTCATACTTGCTGACTGGTGAAGAAGGTCACAATGCGCCCAAAGGTTTCGTGGAGCTTGATCCTGCTTCTACACCTATGGAACTTCTTCAGTTGGTCACTGAAACTGCAAAGCAAGAAATGGAAATGACAAATGAAAAGTCTCTAAAGGATGAATTGAGGCCCGAAGAGAATTCCAGGGTGGATGGTTCTGTTTTGAGAGGCCCGGCAACTGAGGGTGAAGATTCTGCTGAAGGTGTCCCTAGAAATGAGGTGGCTGAAGAACTGGCAAATAAGCCAAAACAGCCTGAGATTTTGCTTGTATATGAAAGGAAACGTAAAAGGGTAAAGAGCTAG 2337 0.4292 MEGNRDTALMVKEIAEKKLLQKDLGGARLFARRAHDFYPELDGLPQLLATIEVHIAGENKVNGGEVDWYRVLGLQPFADDETIRKRYRKLALALHPDKNKSVGADGAFNLISQAWSLLSDKAKRAAYDSNYRLWSIHRGIPGGKPAIPTSRNNGFYNTFNTDDGKARDQRSVAHPNPAPGPPATSDQTFWTKCSSCRLHCEYPAVYKNSYLICVKCKKPFLASEVQPPPAFVKVSSTSSISQMQQQNFNSTRMERGSHTSASTASEAPGVFRMSSENLKRRREDSTPVMWEEVHLGKPYAVERTVAGSAFQSSFNGSNPVLKGDGPMKKCCTDELHKFDSDRSGMEAKVAFQKATGLANEFGSQKNGFYTRKVNAAGNHKPNGIRDGSQQMKSMLMVKARNVIRKQLDEWRASSVSKNLNKPNNTDTEVREKNKDRAINGMKPPAKEFVDSETLGKKCLSTDSELPPSVSFTVPDPDFHDFDGDRIEDSFGENQVWAIYDEDDGMPRYYALIHSVISKNPFQMKISWLSCKTNDEFAPINWISSGFPKTTGDFRPGKRDIYSTLNSFSHMVKWTKGSRGAVHIYPKKGDVWALYRNWSADWNELTKDEIIHEYDMVEVLEDYSEEKGVNVAPLLKVAGFKTVFRQNADPRKIRNIPKEEMFRFSHQVPSYLLTGEEGHNAPKGFVELDPASTPMELLQLVTETAKQEMEMTNEKSLKDELRPEENSRVDGSVLRGPATEGEDSAEGVPRNEVAEELANKPKQPEILLVYERKRKRVKS* 779
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g4318 778 PANTHER HEAT SHOCK PROTEIN-LIKE 1 719 - -
Lja1g4318 778 MobiDBLite consensus disorder prediction 707 728 - -
Lja1g4318 778 CDD DnaJ 67 120 IPR001623 -
Lja1g4318 778 MobiDBLite consensus disorder prediction 744 758 - -
Lja1g4318 778 Pfam DnaJ domain 67 128 IPR001623 -
Lja1g4318 778 SMART dnaj_3 66 123 IPR001623 -
Lja1g4318 778 MobiDBLite consensus disorder prediction 158 186 - -
Lja1g4318 778 ProSitePatterns Nt-dnaJ domain signature. 108 127 IPR018253 -
Lja1g4318 778 ProSiteProfiles dnaJ domain profile. 67 131 IPR001623 -
Lja1g4318 778 PANTHER BNAC03G44070D PROTEIN 1 719 - -
Lja1g4318 778 Gene3D DnaJ domain 55 137 IPR036869 -
Lja1g4318 778 Pfam Domain of unknown function (DUF3444) 470 676 IPR024593 -
Lja1g4318 778 MobiDBLite consensus disorder prediction 707 763 - -
Lja1g4318 778 PRINTS DnaJ domain signature 87 102 IPR001623 -
Lja1g4318 778 PRINTS DnaJ domain signature 103 123 IPR001623 -
Lja1g4318 778 PRINTS DnaJ domain signature 69 87 IPR001623 -
Lja1g4318 778 SUPERFAMILY Chaperone J-domain 57 127 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g4318 Lja-Chr1 55710094 55712801 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g4318 4 229 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 32.189 2.76e-25 106