Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g4284 ATGTCAGGGGATTCAGTCACCTTAATAGGGTTCTGGGGTAGTCCATTTGTCTTCAGTGTCAAGTGGGCTCTTGAACTAAAAGGGGTGAAATACCAATATGTGGAAGAAGATCTCAGCAACAAAAGTGCCATGCTCCTACAGTGTAATCCTGTTTACAAGCAGGTACCAGTTCTGGTGCATGATGGTAAGCCCCTGGCAGAATCACAAGTGATTCTTGAGTATATTGATGAGACCTGGAAGCAAAATCCTCTTCTTCCACATGATCCCTATGAAAGAGCCAAGGCCAGATTCTGGTCCAAATTCACTCAAGAAAAGTGTGAACCAGTACTTAAAGCAACCTTTCTCAAAGCAGGGGAGGAACAACAAAAGGCAGTACAAGAAGTTAGAGAGAATCTAAAGACCCTTGAAGGTGGACTTGAGGGAAAACGCTACTTTGGAGGTGAGGGAATAGGCTTTACTGATATTGCTATTGGGTGGCTTGGATATTGGGTTCGAATAGTGGAGGAGATTGTGGGTATAAGCCTAGTTGATACAGAATCGATGGCTAAGCTTAATGCTTGGTTCGATGATTTTCTTGAGCTTCCTATTATCAAAGAATCCATGCCAAATCGTGATAAACTGCTTCAGTACATCAAGACCTTCCACAATGCGTTGACGCCCCCATCCACCTGA 672 0.4375 MSGDSVTLIGFWGSPFVFSVKWALELKGVKYQYVEEDLSNKSAMLLQCNPVYKQVPVLVHDGKPLAESQVILEYIDETWKQNPLLPHDPYERAKARFWSKFTQEKCEPVLKATFLKAGEEQQKAVQEVRENLKTLEGGLEGKRYFGGEGIGFTDIAIGWLGYWVRIVEEIVGISLVDTESMAKLNAWFDDFLELPIIKESMPNRDKLLQYIKTFHNALTPPST* 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g4284 223 Pfam Glutathione S-transferase, N-terminal domain 5 77 IPR004045 -
Lja1g4284 223 Gene3D - 85 222 - -
Lja1g4284 223 SFLD Main.3: Omega- and Tau-like 3 218 IPR045073 -
Lja1g4284 223 CDD GST_C_Tau 89 214 IPR045074 GO:0004364|GO:0006749
Lja1g4284 223 Pfam Glutathione S-transferase, C-terminal domain 118 195 IPR004046 -
Lja1g4284 223 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 1 218 IPR045073 -
Lja1g4284 223 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 88 214 IPR010987 -
Lja1g4284 223 CDD GST_N_Tau 6 79 - -
Lja1g4284 223 SUPERFAMILY GST C-terminal domain-like 77 216 IPR036282 -
Lja1g4284 223 SFLD Glutathione Transferase (cytosolic) 3 218 IPR040079 -
Lja1g4284 223 PANTHER GLUTATHIONE S-TRANSFERASE ISOFORM X1-RELATED 1 218 - -
Lja1g4284 223 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 4 83 IPR004045 -
Lja1g4284 223 Gene3D Glutaredoxin 1 84 - -
Lja1g4284 223 SUPERFAMILY Thioredoxin-like 5 105 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g4284 Lja-Chr1 55144623 55145899 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g4284 2 223 Glutathione S-transferase Gene Family AT2G29420 44.595 4.26e-69 209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g4284 K00799 - gmx:100813267 355.14