Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g4251 ATGAATACTACCAGAAAAGATGAAGCAGAACGGTTGCTAGAGTTCGCTGAGCAACGATTACAAAAGCATGATCTCAAGGGTTCAAGGCAATTGGCCATCATAGCCCAAGACACTGAACCCCTTCTCGAAGGTTCTGACCAAATCCTCGCCATCATTGACGTCCTTGAAGCATCAAAGAAGAAGCCCCTCAACACCAATAACAACATCGACTATTATGCTATTCTCCAAGTAGATCATTGGAACTCCCAAGACCTCAATCTTATTAAGAAGCAATATCGTAGGCTTGCACTCCTTCTCGACCCCGATAGGAACCTGTTTTCCTTTTCCCACCACACCTTCAAGCTTGTTTCCCATGCCTGGTCTCTCTTATCTGACCCAGTCCAGAAGCAAATCTACGACATGGGCTTGAACCGTGGTATGGGTAGCTTCTGGACCACATGCCCATACTGTTACCACATGTATGAGTACCTTGTGGTTTACGAGGGTTGTTTCATAAGGTGCCAGAAGTGCACTAGGCCATTCCATGGGGCACGTGTTCGTTCCATGCCGCAGATGGTGCCTGGGCAAGAGGCTTATTACTTTTCCTCGGGATCGTCTCCAACGGGTCTTGAGTTCAAAAGATTAGAGAATGGTGGGCGTATTCAACAACCGACGAAGGCAACGATGACAACACCAGTTCCCAATGTTGCTTCTGCTCCGAGGAAGCGAGGAAGGCCTCGAAAGGTTGTGGTTTGA 735 0.4789 MNTTRKDEAERLLEFAEQRLQKHDLKGSRQLAIIAQDTEPLLEGSDQILAIIDVLEASKKKPLNTNNNIDYYAILQVDHWNSQDLNLIKKQYRRLALLLDPDRNLFSFSHHTFKLVSHAWSLLSDPVQKQIYDMGLNRGMGSFWTTCPYCYHMYEYLVVYEGCFIRCQKCTRPFHGARVRSMPQMVPGQEAYYFSSGSSPTGLEFKRLENGGRIQQPTKATMTTPVPNVASAPRKRGRPRKVVV* 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g4251 244 ProSitePatterns Nt-dnaJ domain signature. 113 132 IPR018253 -
Lja1g4251 244 PANTHER CHAPERONE DNAJ-DOMAIN PROTEIN 4 237 - -
Lja1g4251 244 SUPERFAMILY Chaperone J-domain 65 138 IPR036869 -
Lja1g4251 244 MobiDBLite consensus disorder prediction 217 244 - -
Lja1g4251 244 CDD DnaJ 70 125 IPR001623 -
Lja1g4251 244 Pfam DnaJ domain 70 133 IPR001623 -
Lja1g4251 244 ProSiteProfiles dnaJ domain profile. 70 136 IPR001623 -
Lja1g4251 244 Coils Coil 6 26 - -
Lja1g4251 244 SMART dnaj_3 69 128 IPR001623 -
Lja1g4251 244 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 4 237 - -
Lja1g4251 244 Gene3D DnaJ domain 55 145 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g4251 Lja-Chr1 54531620 54532354 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g4251 2 203 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 45.333 3.45e-61 194
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g4251 - - lja:Lj1g3v1560100.1 327.405
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g4251 1 54531620 54532354 Lja1g4251 1 54531620 54532354 ECH