Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g4237 ATGAATACTACCAAGAAAGATGAAGCAGAACGGTTGCTAGAGTTCGCTGAGCAACGATTACAAAAGCATGATCTCAAGGGTTCACGACAACTGGCCCTCATAGCCCAAGACACTGAACCTCTTCTCGAAGGTTCTGACCAGATCCTCGCCATCATTGATGTCCTTGAAGCATCAGAGAAGAAGCCCCTCAACACCAATAACAACCTCGACTACTATGGTATTCTCCAAGTAGATCGTTGGAACTCCCAAGACCTCAATCTTATTAAGAAGCAATACCGCAGGCTTGCACTCCTCCTCGACCCCGATAGGAACCTCTTTTCCTTCTCCCATCACACCTTCAAGCTTGTTTCCCATGCCTGGTCTCTCTTATCTGATCCGGTCCAGAAGCACATCTACGACACTAGCTTGAATCGTGGCATGGGTAGTTTTTGGACCGCGTGCCCATATTGTTACCACATGTATGAGTACCTTGTGGTTTATGAGGGTTGTTTCTTGAGGTGCCAGAAGTGCACTAGGCCCTTCCATGGGGCTCGTGTTCGTTCCATGCCGCAGATGGTGCCAGGGAAAGAGGCCTATTACTTTTCCTCGGGATCGTTTCCAACGGGTCTTGAGTTCAAAAAATTAGAGAATGGTGGGCGTATTCAACAACCAACAGAGGCAACGACGACAACACCAATTCTCAATGTTGCATATGCTCCGAGGAAGCGAGGAAGGCCCCGAAAGGTTTTAGTTTGA 735 0.4816 MNTTKKDEAERLLEFAEQRLQKHDLKGSRQLALIAQDTEPLLEGSDQILAIIDVLEASEKKPLNTNNNLDYYGILQVDRWNSQDLNLIKKQYRRLALLLDPDRNLFSFSHHTFKLVSHAWSLLSDPVQKHIYDTSLNRGMGSFWTACPYCYHMYEYLVVYEGCFLRCQKCTRPFHGARVRSMPQMVPGKEAYYFSSGSFPTGLEFKKLENGGRIQQPTEATTTTPILNVAYAPRKRGRPRKVLV* 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g4237 244 ProSitePatterns Nt-dnaJ domain signature. 113 132 IPR018253 -
Lja1g4237 244 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 4 223 - -
Lja1g4237 244 PANTHER CHAPERONE DNAJ-DOMAIN PROTEIN 4 223 - -
Lja1g4237 244 CDD DnaJ 70 125 IPR001623 -
Lja1g4237 244 Gene3D DnaJ domain 55 144 IPR036869 -
Lja1g4237 244 Coils Coil 6 26 - -
Lja1g4237 244 Pfam DnaJ domain 70 133 IPR001623 -
Lja1g4237 244 SUPERFAMILY Chaperone J-domain 65 138 IPR036869 -
Lja1g4237 244 SMART dnaj_3 69 128 IPR001623 -
Lja1g4237 244 ProSiteProfiles dnaJ domain profile. 70 136 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g4237 Lja-Chr1 54257422 54258156 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g4237 2 203 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 45.778 1.53e-62 197
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g4237 - - lja:Lj1g3v1560100.1 337.806