Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g4234 ATGGCAATGCTTAGTTCTCATGATCATGGAACTACGAGATGCTTCTTAATTTGGAGCATGCTTCTATCGCTTGTGTTGCATATTTCATCTCAGCTAGCGAAATCTCACTCCACAGTGCAGTTCCTTCCCGGCTTCAATGGACCCCTTCCTTTTCTACTCGAAACCGGGTACGTGGAAGTGGGTGAAACGGAAACGGAGCTTCATGGGGAGCTATTCTACTATTTTATTGAGTCAGAGAGCAATCCTCAAGAGGATCCTCTCTTGCTTTGGCTAACTGGTGGTCCTGGTTGCTCTGCACTTTCTGGCCTTGTCTTTGAAATAGGTCCACTCACATTTAAAAAGGAGGAATACAATGGGAGCTTACCTAATTTAGCCCTCAATCCACATTCATGGACAAAGGTAAGTAGCATTATTTTTTTAGATTCACCTCTTGGTACTGGATTCTCATATCCCAAAACAGAACTCGCTGCTCAACAAAGTACCTCGAAGCTAGTTCAGAATGCTCACCAGTTTCTTAGGAAGTGGCTAGTTGATCATCCGAAATTTCTGCCAAATGAAGTGTACATTGCTGGCGACTCATACTCTGGCATTCCTCTCCCAGTGATTGTTCAAGAAATTTCAGATGGAAATGATGGTGGTGTCCAACCGTGGATAAATCTCCAGGGGTACCTGCTGGGGAACCCCTTAACAGCACGAACCGAAGATAATTACCAAATACCATTTAGTCATGGCATGGGACTAATTTCTGATGAACTCTACGAGTCACTACAGAAAAATTGTAGAGGAGAGTATCGGAATATAGACCCCGGAAATGTATTGTGCCTAAGAGACAAAGAATACTATGAGGAGACTATTTCAGGAATTGATACTAATCATATCTTGGAACCCAAGTGCGAGTTCGGTCTGCGTAATCCAATTGAAAACCCTTGGAAGGCCACCACCATTTTCAGTTCTGGTCTTGCATTGCCACCCTTAAACTGTCGGAGTCATGCATATTTCCTCTGTGCTTATTGGGCCAACAATGATAATGTTCGCAAAGCACTTCATATTCGAAAGGGAAGTAAAGGGGAATGGAAGCGCTGTGACTTTGACATACCTTTCAAGTTCGATATCCATGAAAGCTTACCCTATCATGTAAATCTTAGCAGAAAAGGTTATCGTTCATTAATATACAGTGGGGATCATGACATGAGAGTTCCATTCTTGGACACTCAAGCATGGATAAGATCCCTAAACTATTCCATAGTGGATGACTGGAGGCAATGGTATTCAAATGGCCAAGTAGCAGGATACACGAGGACTTACTCAAATAGGATGACATTTGCAACTGTGAAGGGTGGAGGACATACAGCCCCTGAGTACAGACCTGAAGAGTGTTTAGCCATGTTCAGTAGGTGGATATCTAATAGGCCACTTTAG 1419 0.4313 MAMLSSHDHGTTRCFLIWSMLLSLVLHISSQLAKSHSTVQFLPGFNGPLPFLLETGYVEVGETETELHGELFYYFIESESNPQEDPLLLWLTGGPGCSALSGLVFEIGPLTFKKEEYNGSLPNLALNPHSWTKVSSIIFLDSPLGTGFSYPKTELAAQQSTSKLVQNAHQFLRKWLVDHPKFLPNEVYIAGDSYSGIPLPVIVQEISDGNDGGVQPWINLQGYLLGNPLTARTEDNYQIPFSHGMGLISDELYESLQKNCRGEYRNIDPGNVLCLRDKEYYEETISGIDTNHILEPKCEFGLRNPIENPWKATTIFSSGLALPPLNCRSHAYFLCAYWANNDNVRKALHIRKGSKGEWKRCDFDIPFKFDIHESLPYHVNLSRKGYRSLIYSGDHDMRVPFLDTQAWIRSLNYSIVDDWRQWYSNGQVAGYTRTYSNRMTFATVKGGGHTAPEYRPEECLAMFSRWISNRPL* 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g4234 472 PANTHER 1-O-ACYLGLUCOSE:ANTHOCYANIN ACYLTRANSFERASE 19 471 - -
Lja1g4234 472 Gene3D alpha/beta hydrolase 49 472 IPR029058 -
Lja1g4234 472 SUPERFAMILY alpha/beta-Hydrolases 39 471 IPR029058 -
Lja1g4234 472 PRINTS Carboxypeptidase C serine protease (S10) family signature 127 139 IPR001563 GO:0004185|GO:0006508
Lja1g4234 472 PRINTS Carboxypeptidase C serine protease (S10) family signature 175 200 IPR001563 GO:0004185|GO:0006508
Lja1g4234 472 PRINTS Carboxypeptidase C serine protease (S10) family signature 140 150 IPR001563 GO:0004185|GO:0006508
Lja1g4234 472 PRINTS Carboxypeptidase C serine protease (S10) family signature 439 452 IPR001563 GO:0004185|GO:0006508
Lja1g4234 472 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 19 471 IPR001563 GO:0004185|GO:0006508
Lja1g4234 472 Pfam Serine carboxypeptidase 43 469 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g4234 Lja-Chr1 54189546 54193865 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g4234 33 62 Calmodulin-binding Proteins AT2G22960 63.333 8.03e-06 44.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g4234 K16296 - gmx:100792006 650.973