Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g4225 ATGGCTGTTGCTGGTGGGGTCCCGGAAAACCTAAGCAGGGAACAGTATGTCTACCTCGCCAAGCTAGCGGAGCAGGCGGAGCGCTACGAGGAGATGGTGGAGTTCATGCAGAAGCTCGTGGTAGGGTCCACACCCGCGGCGGAGCTCAGCGTGGAGGAGCGCAACCTCCTCTCCGTCGCCTACAAGAACGTCATCGGCTCCCTCCGTGCGGCGTGGCGGATCGTCTCGTCGATTGAGCAGAAGGAGGAGAGTCGGAAGAACGACGACCATGTGGTTCTTGTGAAGGATTACAGATCCAAGGTGGAGGTTGAGCTTTCCAACATCTGTGCTAGCATCCTCAACCTTTTGGATTCCAATCTCATCCCTTCTGCTTCTTCCAGTGAATCCAAAGTTTTCTATTACAAGATGAAAGGGGATTATCATAGGTACTTGGCTGAGTTTAGGGTTGGTGATCAGAGAAAAGCTTCTGCTGAAGATACTATGTTGTCTTACAAGGCTGCACAGGACATTGCTGCTACTGATCTTCCACCTACTCATCCTATAAGATTGGGTTTGGCACTCAATTTCTCTGTGTTCTACTATGAAATTCTCAACCAGTCTGACAAAGCATGTGCCATGGCTAAACAGGCATTTGAGGAAGCAATTGCTGAGCTGGACACCTTGGGAGAAGAATCCTACAAAGACAGCACCCTCATCATGCAGCTTTTAAGAGACAACCTGACCCTTTGGACTTCTGATGTCCAGGACCAGCTAGATGAGCCCTGA 765 0.5046 MAVAGGVPENLSREQYVYLAKLAEQAERYEEMVEFMQKLVVGSTPAAELSVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEESRKNDDHVVLVKDYRSKVEVELSNICASILNLLDSNLIPSASSSESKVFYYKMKGDYHRYLAEFRVGDQRKASAEDTMLSYKAAQDIAATDLPPTHPIRLGLALNFSVFYYEILNQSDKACAMAKQAFEEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDVQDQLDEP* 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g4225 254 PRINTS 14-3-3 protein zeta signature 128 150 IPR000308 -
Lja1g4225 254 PRINTS 14-3-3 protein zeta signature 190 216 IPR000308 -
Lja1g4225 254 PRINTS 14-3-3 protein zeta signature 48 77 IPR000308 -
Lja1g4225 254 PRINTS 14-3-3 protein zeta signature 217 246 IPR000308 -
Lja1g4225 254 PRINTS 14-3-3 protein zeta signature 163 189 IPR000308 -
Lja1g4225 254 PRINTS 14-3-3 protein zeta signature 97 121 IPR000308 -
Lja1g4225 254 PANTHER BNAC02G00320D PROTEIN 10 250 - -
Lja1g4225 254 SMART 1433_4 13 253 IPR023410 -
Lja1g4225 254 PIRSF 14-3-3 8 253 IPR000308 -
Lja1g4225 254 Coils Coil 19 39 - -
Lja1g4225 254 ProSitePatterns 14-3-3 proteins signature 1. 54 64 IPR023409 -
Lja1g4225 254 SUPERFAMILY 14-3-3 protein 12 246 IPR036815 -
Lja1g4225 254 PANTHER 14-3-3 PROTEIN 10 250 IPR000308 -
Lja1g4225 254 Gene3D - 5 253 IPR036815 -
Lja1g4225 254 Pfam 14-3-3 protein 19 244 IPR023410 -
Lja1g4225 254 ProSitePatterns 14-3-3 proteins signature 2. 226 245 IPR023409 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g4225 Lja-Chr1 54037020 54040516 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g4225 10 248 14-3-3 family AT5G10450 84.937 1.85e-154 429
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g4225 K06630 - cpap:110825974 444.891
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g4225 1 54037020 54040516 Lja1g4225 1 54037020 54040516 ECH