Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g4220 ATGGAAGAACATTGTGGAACCTGGAAACAGCATCCGCAATTTGGATGGCAATCACCAAATTTGAGTTCCCATGATGTGGGGAAGCGAGATGGCATTTGTGCAAATATGAACCCTCCTGGTGTCAATTTTGAACCAAATACAATGCCAGCTTTTGGGTCCTCAGCACTGCCTCATTTGCAGTTTGGACATTCTTATGAACCCCATGGTTGGTTTTATTGTTTGCCTCGCTTTCGGCAAGGATTTATTCCTGCTCCAAGCTTCGCTGCTGAGGAAAAACCCTCTGCTGACCATGTGAAAGGTTTTAGGGACAAAATTGCTCCCTGTGATGAATCAAGCTCCCCTCAGAAACAATTCCTTGTTGTTGACCAGACGTGTGGTCGAACAACTGTTGTTTATAGTTCTAGGTTTGGGAGTCCCAATGAGTGCCTTGACTCCTGGCATTCAAAACTGTATGGTACTAACTATTGGAGTGGGAATGAACCTTCCTTTAGAAGAGATTTGAATTTGAATTTGAATCAGATGACTGGGCCAACTTTGGCCGATCAAGTCGATGAGAATCAGGGAACTGATAATGAAAGTGAGATGCATGAAGACACAGAAGAAATTAATGCATTGCTTTACTCAGACAGTGAGGCCTACTCTGCCGAGGATGATGATGACGATGATGAAGTTACTAGCACAGGGCACTCTCCCAGCACAATGACCACTCATGATAACCACAAAACCTTAAGGGGAACTGCAGAAGAAGTTGCGAGCTCTGCTGGGAAAGCCAAGAAGAGGAAGTTAGTGGATGGTTATAATGATGACATACAAGTCATGGATACTGCTAATTCTCTGCAGCATAAAAAATCCCCAGCCGTGGGTGATAATGATGCAGAATCAAGATGTTCTTATGGCAACATTGAAGGATCAGGCAATAAGAAGATGAAAAAGGAGAAGATACGAGATGTCCTGAGCGTTCTAGAGAGCATAATTCCCGGTGGCAAGGATAAGAACCCGGTCATGCTTCTCGAAGATGCCATAAGTTGCTTGAAATCCTTGAAACACAAGGCTAAAGCTCTAGGCCTCGATGCCCTGTAA 1080 0.4417 MEEHCGTWKQHPQFGWQSPNLSSHDVGKRDGICANMNPPGVNFEPNTMPAFGSSALPHLQFGHSYEPHGWFYCLPRFRQGFIPAPSFAAEEKPSADHVKGFRDKIAPCDESSSPQKQFLVVDQTCGRTTVVYSSRFGSPNECLDSWHSKLYGTNYWSGNEPSFRRDLNLNLNQMTGPTLADQVDENQGTDNESEMHEDTEEINALLYSDSEAYSAEDDDDDDEVTSTGHSPSTMTTHDNHKTLRGTAEEVASSAGKAKKRKLVDGYNDDIQVMDTANSLQHKKSPAVGDNDAESRCSYGNIEGSGNKKMKKEKIRDVLSVLESIIPGGKDKNPVMLLEDAISCLKSLKHKAKALGLDAL* 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g4220 359 MobiDBLite consensus disorder prediction 179 199 - -
Lja1g4220 359 MobiDBLite consensus disorder prediction 213 260 - -
Lja1g4220 359 PANTHER TRANSCRIPTION FACTOR BHLH145 1 357 IPR037546 -
Lja1g4220 359 PANTHER TRANSCRIPTION FACTOR BHLH145 1 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g4220 Lja-Chr1 53955219 53956298 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g4220 69 352 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G50010 29.371 2.71e-20 88.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g4220 - - gmx:102668102 475.322
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g4220 1 53955219 53956298 Lja1g4220 1 53955219 53956298 ECH