Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g4188 ATGGATACCACTTGTAGTCACACTGCTAGAGTTTTCGGACAAGGAGTTGTTATCTTCCTTGTGATTATGTCACTGGCTGCAGGGAGCGATGGCAGAAGCATCACAGTTGGAGATTCTCATGGTTGGAGTGCAGGCACTAACTACACCCAATGGGCTACCAAAAACAGTCCCTTCCACATAAATGACACATTGGTGTTCAAGTACCCTCTGCCAGGGAATTCTACGATTGCTCAGAGTGTGTACATGCTTCCAAACTTGTGGAGCTACACAACCTGTCAATTCAGAGGAGCAAAGCTTTTGGGGAGTGCTGCTCAAGGTGCAGGTGAGGGGTTAAAGGTTGAGCTCAATCAGTCCAGGCCTTATTACTTTGCCTCTGCAGAAGGGAACGCCTATGATTGCATTGCTGGTCTCACCAAGTTCATCGCTGTTCCATCATCTACACATTTATATTGA 453 0.468 MDTTCSHTARVFGQGVVIFLVIMSLAAGSDGRSITVGDSHGWSAGTNYTQWATKNSPFHINDTLVFKYPLPGNSTIAQSVYMLPNLWSYTTCQFRGAKLLGSAAQGAGEGLKVELNQSRPYYFASAEGNAYDCIAGLTKFIAVPSSTHLY* 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g4188 150 PANTHER PLASTOCYANIN-LIKE DOMAIN PROTEIN 12 146 - -
Lja1g4188 150 ProSiteProfiles Phytocyanin domain profile. 32 146 IPR003245 GO:0009055
Lja1g4188 150 SUPERFAMILY Cupredoxins 32 143 IPR008972 -
Lja1g4188 150 PANTHER GLYCINE-RICH PROTEIN-LIKE 12 146 - -
Lja1g4188 150 Pfam Plastocyanin-like domain 42 127 IPR003245 GO:0009055
Lja1g4188 150 Gene3D - 30 145 IPR008972 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g4188 17 148 Phytocyanin Superfamily AT4G32490 29.496 1.33e-07 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g4188 - - vra:106760467 218.009
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g4188 1 53408323 53409102 Lja1g4188 1 53408323 53409102 ECH