Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g4174 ATGGATCCATCAAACCCAGAAATCGTTCTCGAGGTTCCACCATATCTCCAAGTACACAAAAACGGAACCATAGAGAGATTCGCCGGCACCGAAGTTGCCCCTGCAGGCTTCGATTCAGAAACCAATGTTGTCTCCAAAGACATCCTCATCATACCAGAAACTGGTGTCACAGCCCGGTTTTACTACCCCAATTCCGCCGCCAAAACCACCAAACTCCCCTTAGTTTTCTACCTTCACGGTGGTGCCTTCTGCATCTCTTCACCCTCTGATCCTCTGTACCATAACTCCCTCAACAGGCTCGTGGCAGAGTCCAACGTTGTTGCTGTCTCTGTTGATTACAGGTTAGCACCGGAGCACCCTCTTCCCGCTGCGTATGAAGATTCTTGGGCTGCGCTTAAATGGGTTGCTTCTCATGCTTCTGAGCATGATGATGGTGAAGGTGAAGGGTGTGGGAATTTGCTCAGAGACAGAGTTGATTTTAAGAAAGTGTTCTTGGCAGGGGATAGTGCAGGGGCTAACATGGGTCACTACATGGCGTTGAAGTTGAATGCTCTGAGCTCTGAACCCAATTTCAATGTTCTGGGTCTTGTCATGGTTAATCCTTATTTCTGGGGGAAGGAACCAATTGGGGTGGAGATTACTGATACAGAGAGGAAGAAAATGGTGGATTTGTGGTGGGGTTTTCTTTGTCCTTCAGATAAAGGGAGTGATGACCCTTTAATCAACCCTTTTGTGGAGGAAGCTCCTGGTTTTGAAGGTGTTGGTTGCAATAAGGTGCTTGTGATTGTTGCTGAGAAGGACATTCTGAAGGAAAGAGGGAAGCTTTATCATAAAAAATTGGTTAATAGCTCTTGGCAAGGAACAGCTGAGTTTTATGAGATTCAAGGGGAGGATCATGTTTTTCACATCTTCAACCCAGATTGTGACAATGCTAAGAGCTTGTTTAAGCGCATAGCAGCTTTCATCAATGAACAGTGA 978 0.4611 MDPSNPEIVLEVPPYLQVHKNGTIERFAGTEVAPAGFDSETNVVSKDILIIPETGVTARFYYPNSAAKTTKLPLVFYLHGGAFCISSPSDPLYHNSLNRLVAESNVVAVSVDYRLAPEHPLPAAYEDSWAALKWVASHASEHDDGEGEGCGNLLRDRVDFKKVFLAGDSAGANMGHYMALKLNALSSEPNFNVLGLVMVNPYFWGKEPIGVEITDTERKKMVDLWWGFLCPSDKGSDDPLINPFVEEAPGFEGVGCNKVLVIVAEKDILKERGKLYHKKLVNSSWQGTAEFYEIQGEDHVFHIFNPDCDNAKSLFKRIAAFINEQ* 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g4174 325 Pfam alpha/beta hydrolase fold 75 302 IPR013094 GO:0016787
Lja1g4174 325 PANTHER PUTATIVE-RELATED 4 323 - -
Lja1g4174 325 Gene3D alpha/beta hydrolase 11 325 IPR029058 -
Lja1g4174 325 PANTHER ARYLACETAMIDE DEACETYLASE 4 323 - -
Lja1g4174 325 SUPERFAMILY alpha/beta-Hydrolases 5 324 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g4174 Lja-Chr1 53134467 53135815 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g4174 5 323 Carbohydrate Esterase AT3G48700 42.598 4.26e-85 258
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g4174 - - var:108341277 488.034
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g4174 1 53134467 53135815 Lja1g4174 1 53134467 53135815 ECH