Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g4156 ATGAACTTTAAGGGGTTTGTTAACGACCCAGGTGGCGCCGATAACGGCAACGGCGGAGGAAGGCCGCCGCCGGGGGGGTTTCCACTGGCGCGGCAGTCGTCGGTGTACTCGCTGACGTTCGACGAGTTCATGACAAGCATGGGGGGTTCAGGGAGGGACTTTGGTTCAATGAACATGGACGAGTTGCTGAAGAATATTTGGAGTGCGGAGGAGGTTCAATCAATAGGTGGTGGTGTTGGTGGTGGTGGTGAAGAGGGTGGTGGTGGTGCGGCGGTGGGGCATTTGCAGAGGCAAGGGTCGTTGACGCTGCCAAGGACTCTCAGCCATAAGACAGTGGACCAGGTTTGGAAGGACATTTCCAAGGATTATGGTCCGAGCTTGGTGGCGCCGCCGCGACAGCCGACGTTGGGGGAGATGACGCTGGAGGAGTTCTTGGTGAGAGCTGGTGTTGTTAGAGAAGACGCGAAGAACGATGCGGTTTTCGCTGATCTGGCTCGTGCTGGGAACAATAGTGGTTTGGGATTTGAGTTTCAGGCTCAGCAGATGAACAGGATTGCTGGTTTGATGGGTGGTAATAATAGGATTCCTGGTGCCAGTGATGATCCAATTGTGTCTCTTCAGAATTCTACCAATTTGCCCTTGAATGCTAATGGTTTCAGATCACCAAATCAGCAACAACAGATGCAGAATTCACATCAGCAGAATCATCAGCAGCAGCAGCATCATCAGCAACAACAGATCTTTCCTAAGCAACCTGCTTTGAACTATGCTACTCAGATGCCTAATCAAGGAATCAGGGGTGGGATTGTGGGGCTTTCTGCTGATCAGGGCATGAATGGTAATCTAGCACAAGGTGGAGGGATTGGTGGTTTGGTTGGTTTGGCACCTGGGCCTGTTCAACTTGCTTCTGGGTCACCAGCTAACCAGATGAGCTCCAGTGATATAATGGGAAAGAGTAATGGGGACACTTCTTCTGTATCGCCGGTTCCTTATGTCTTTAACGGCGGTCTGCGAGGGAGGAAGACTGGAGCTGTGGAGAAGGTAATTGAGAGGAGGCAGAGAAGAATGATAAAGAATAGAGAGTCAGCTGCTAGATCCCGGGCTCGCAAGCAGGCTTATACAATGGAATTGGAACAAGAAGTTGCAAAGTTAAAAGAGGAGAACGAAGAACTTCAGAAAAAGCAGGAAGAAATCATGGAAATGCAGAAAAACCAAGTTCAGGAAATGATGAATTTGCAGCGAGAAGTCAAGAGGAAATGCTTAAGAAGAACACAAACTGGTCCATGGTAG 1290 0.4992 MNFKGFVNDPGGADNGNGGGRPPPGGFPLARQSSVYSLTFDEFMTSMGGSGRDFGSMNMDELLKNIWSAEEVQSIGGGVGGGGEEGGGGAAVGHLQRQGSLTLPRTLSHKTVDQVWKDISKDYGPSLVAPPRQPTLGEMTLEEFLVRAGVVREDAKNDAVFADLARAGNNSGLGFEFQAQQMNRIAGLMGGNNRIPGASDDPIVSLQNSTNLPLNANGFRSPNQQQQMQNSHQQNHQQQQHHQQQQIFPKQPALNYATQMPNQGIRGGIVGLSADQGMNGNLAQGGGIGGLVGLAPGPVQLASGSPANQMSSSDIMGKSNGDTSSVSPVPYVFNGGLRGRKTGAVEKVIERRQRRMIKNRESAARSRARKQAYTMELEQEVAKLKEENEELQKKQEEIMEMQKNQVQEMMNLQREVKRKCLRRTQTGPW* 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g4156 429 MobiDBLite consensus disorder prediction 1 30 - -
Lja1g4156 429 Coils Coil 367 419 - -
Lja1g4156 429 MobiDBLite consensus disorder prediction 202 248 - -
Lja1g4156 429 MobiDBLite consensus disorder prediction 199 248 - -
Lja1g4156 429 Gene3D - 349 406 - -
Lja1g4156 429 SUPERFAMILY Leucine zipper domain 351 401 IPR046347 GO:0003700|GO:0006355
Lja1g4156 429 SMART brlzneu 347 415 IPR004827 GO:0003700|GO:0006355
Lja1g4156 429 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 349 400 IPR004827 GO:0003700|GO:0006355
Lja1g4156 429 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 6 429 IPR043452 GO:0003700|GO:0045893
Lja1g4156 429 CDD bZIP_plant_BZIP46 351 405 - -
Lja1g4156 429 MobiDBLite consensus disorder prediction 303 324 - -
Lja1g4156 429 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 354 369 IPR004827 GO:0003700|GO:0006355
Lja1g4156 429 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 6 429 - -
Lja1g4156 429 Pfam bZIP transcription factor 351 404 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g4156 Lja-Chr1 52984198 52988382 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g4156 1 429 bZIP Transcription Factor Family AT4G34000 45.603 7.79e-91 280
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lja1g4156 bZIP_1 5.4e-14 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g4156 K14432 - gmx:100819313 475.322
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g4156 1 52984198 52988382 Lja1g4156 1 52984198 52988382 ECH