Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g4147 ATGAGTACCCCATCTGTTCAACTCATTTCTGAATGCTTCATCAAGCCGTATAGCCCCATCGAAGACTCAAACCAAATATGCTATCTAACACCCTGGGATATAGCTTTGTTGTCTGTGCACTACATCCAGAAGGGCCTGCTCTTCAAGAAGCCTGAATCAATTGATAATCAACAAGATTTCATGAACAACCTTTTGGACAACCTCAAACACTCTCTTTCTCTTGCACTTGACCATTTCTATCCACTCGCCGGTCGCCTTGTAACCCAGAAAACCCAAGACCCTCTCTCTTATGCAGTTTTTGTTGATTGCATAAACAGTCCTGGAGCTGGATTCATCCATGCAACTCTAAACATGACCATATCTGACATCCTCTCCCCTGTTGATGTCCCACCTGTTGTTCATTCATTCTTTGACCACCACAAAGCGATCAACCATGACGGTCACACCATGCCTTTGCTGTCAATCAAGGTCACTGAACTCTTAGATGGCGTTTTCATTGGTTGTTCCATGAATCACTGTATTGCTGATGGCACTTCCTATTGGAATTTCTTCAATACATGGTCTGAGCTCTTTCAAGCAAAACCTCAAACACCTCAAGTGCATGTTGATGCTCCCATAATTTCACACAACCCCATTCACAATCGATGGTTTCCACAAGGTTGCAGCGATCGACTAATCAACCTTCCCTTCAAACACCATGATGAATTCATAAGCAGATATGAATCAACCAAGCTCAGAGACAGAATCTTCCATTTTTCAGCAGAGTCTATCACAAAACTGAAAGCAAAGGCCAACTCAGAATCAAACAGTAACAAAATCTCTTCATTCCAATCCTTATCAGCATTTGTTTGGAAATCCATGACCCGCGCTCGCAACTTACAACATGATCAGAAAACATCTTGCAAACTAACCGCAAACAACCGATCGAGAATGGAACCACCTCTGCCTGAGCAATATTTCGGAAACTCAGTTCATGGGCTCGAGGCAGAAGCGACGGCGGGGGAGGTGGTTGAGAACAATCTGGGATGGGCGGCGTGGAAGGTGCATGTGGCGGTTGCGAACCACGGCGATGCGGCGGTGCAGAAGTATGTGAAAGAGTGGTTGCTGTCTCCGATGGTGTATCGGATTGATATGTTGGTGGAAGCGAACAGTGTGATGATGAGTAGTTCACCGAGGTTCAATGTGTATGGGAATGAATTTGGAATGGGGAAAGCGGTGGCGGTTAGAAGTGGTTATGCGAATAAGAGTGATGGTGAAGTGACTGCATATCCAGGTAGAGAAGGAGGGGGAAGTGTTGATTTGGAAGTGTGTCTTTTGCCGGAAACAATGGCGGCTCTGGAATCAGATGAGAAGTTCATGAGCATAGCTTCAGTGTGCAACAATCCCATGTGCTAG 1395 0.4538 MSTPSVQLISECFIKPYSPIEDSNQICYLTPWDIALLSVHYIQKGLLFKKPESIDNQQDFMNNLLDNLKHSLSLALDHFYPLAGRLVTQKTQDPLSYAVFVDCINSPGAGFIHATLNMTISDILSPVDVPPVVHSFFDHHKAINHDGHTMPLLSIKVTELLDGVFIGCSMNHCIADGTSYWNFFNTWSELFQAKPQTPQVHVDAPIISHNPIHNRWFPQGCSDRLINLPFKHHDEFISRYESTKLRDRIFHFSAESITKLKAKANSESNSNKISSFQSLSAFVWKSMTRARNLQHDQKTSCKLTANNRSRMEPPLPEQYFGNSVHGLEAEATAGEVVENNLGWAAWKVHVAVANHGDAAVQKYVKEWLLSPMVYRIDMLVEANSVMMSSSPRFNVYGNEFGMGKAVAVRSGYANKSDGEVTAYPGREGGGSVDLEVCLLPETMAALESDEKFMSIASVCNNPMC* 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g4147 464 Pfam Transferase family 5 452 - -
Lja1g4147 464 Gene3D - 234 448 IPR023213 -
Lja1g4147 464 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 1 456 - -
Lja1g4147 464 Gene3D - 1 233 IPR023213 -
Lja1g4147 464 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 1 456 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g4147 Lja-Chr1 52730121 52731867 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g4147 68 447 Monolignol Biosynthesis Gene Families AT5G48930 27.861 7.48e-32 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g4147 - - gmx:100775661 673.315
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g4147 1 52730121 52731867 Lja1g4147 1 52730121 52731867 ECH