Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g4137 ATGGAAAATGGACTACCTTTGCTTAATTGTCTCTTGCAGCAGACTCTGAGAACCATTTGCACTTCTCCAAATTTTTCCACTTCCTCTAAGTGGGTATATGCTGTCTTCTGGAGAATACTACCCCGGAACTTTCCTCCACCGAGGTGGGAATTTGGAGGAACTGCTCTTGATCGCTCCAAGGGAAATAAGAGAAACTGGATCCTTGTCTGGGAAGATGGGTTCTGTGATTTTGATGAATGTGAGCAGAGGAGGAGTGGATACTTGAACAGCAGGTTTGGCGCGGATGTATTCTTCAAAATGTCTCATGAGGTTTACAGTTATGGAGAGGGACTATTGGGAAAAGTTGCTGCAGATACTAGTCACAAATGGGTTTACAATGACCAGCACAGTGAGTGTGAACCTAGCTACATTGCTTCTTGGAATGCTTCAGTGGAGCCACAACCAAAAGCGTGGGAGTTTCAGTTCAACTCAGGCATTCAGAGTATTGTCCTGATTGCTGTTAGAGAAGGTGTAGTGCAACTGGGTTCCTTTAACAAGATTGCAGAGGACCTCAATCTAGTGATCAGCATACAAAGGAAATTCAGCTACCTTCAAAGCATACCAGGTGTATTCGCTATTCAAAGACCATACCTACCCACCCAATATCCATACATTTTGAAGCCCAGTTTCCAAATGATTGAAGGCAATGGCATTGCTCTATCTACCTATGATTTGAACCAAGTAAATGGAGTCAACAAACAAATTGATGAAAAACCCAACTGTACTTCTAGTTTAGCTATAAACTTGGGTTGCAACATTGGAACAGCAGAATCTCTTCCTTTCCTCAATACCATGATGCCTTGCAGCCTTGGATCTCTACTATCAAAGCTACCCTCAACACTCCCATCACAAAATTCCACTCAAGTCCCTGATGCAGGGATGTTAAGCACCGGGGAGAGAGTGAAGATTGAGGACTGTCATGAATTTCATCCTACCTATGATGTTGATCAGAAAGGTAAGGTTGTTTCCCTGAACAAGCAGGAACTTTAA 1029 0.4305 MENGLPLLNCLLQQTLRTICTSPNFSTSSKWVYAVFWRILPRNFPPPRWEFGGTALDRSKGNKRNWILVWEDGFCDFDECEQRRSGYLNSRFGADVFFKMSHEVYSYGEGLLGKVAADTSHKWVYNDQHSECEPSYIASWNASVEPQPKAWEFQFNSGIQSIVLIAVREGVVQLGSFNKIAEDLNLVISIQRKFSYLQSIPGVFAIQRPYLPTQYPYILKPSFQMIEGNGIALSTYDLNQVNGVNKQIDEKPNCTSSLAINLGCNIGTAESLPFLNTMMPCSLGSLLSKLPSTLPSQNSTQVPDAGMLSTGERVKIEDCHEFHPTYDVDQKGKVVSLNKQEL* 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g4137 342 PANTHER TRANSCRIPTION FACTOR MYC/MYB-RELATED 1 317 - -
Lja1g4137 342 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 12 194 IPR025610 -
Lja1g4137 342 PANTHER TRANSCRIPTION FACTOR MYC/MYB-RELATED 1 317 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g4137 Lja-Chr1 52562633 52564619 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g4137 13 198 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 31.551 1.71e-16 79.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g4137 - - gmx:100793250 435.261
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g4137 1 52562633 52564619 Lja1g4137 1 52562633 52564619 ECH