Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g4111 ATGGCAGAACGAAGGGTTTTCACTCTCTCACAGGTTGCTCAACACAAGTCCAACAAAGATTGTTGGGTTGTGATCAATGGCAGAGTGTTGGATGTCACGAAGTTCTTGATCGAACACCCGGGAGGGGATGACGTGTTGCTAGAGGTTGCGGGGAAAGATGTGACGAAGGAGTTTGATGCTGTTGGGCACAGCAAGGAAGCTCAAAACTTGGTCCTCAAGTACCAAGTGGGTATCCTCCAAGGTGCCACAGTTCAGGAGATTGATGTTGTGCACAAGGAACCAAATAGCAAACAAGAGATGAGTGCTTTTGTGATCAAAGAGGATGCTGAGTCCAAGTCTGTGGCATTATTTGAGTTCTTTGTTCCACTTGTTGTAGCTACTCTCTATTTTGGTTACCGATGCCTCACCAGGACTGACCCTGTTACGTATTAG 432 0.4676 MAERRVFTLSQVAQHKSNKDCWVVINGRVLDVTKFLIEHPGGDDVLLEVAGKDVTKEFDAVGHSKEAQNLVLKYQVGILQGATVQEIDVVHKEPNSKQEMSAFVIKEDAESKSVALFEFFVPLVVATLYFGYRCLTRTDPVTY* 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g4111 143 PRINTS Cytochrome B5 signature 29 39 IPR001199 -
Lja1g4111 143 PRINTS Cytochrome B5 signature 39 53 IPR001199 -
Lja1g4111 143 PRINTS Cytochrome B5 signature 54 61 IPR001199 -
Lja1g4111 143 PRINTS Cytochrome B5 signature 67 79 IPR001199 -
Lja1g4111 143 Gene3D - 1 85 IPR036400 -
Lja1g4111 143 PANTHER CYTOCHROME B5 1 137 - -
Lja1g4111 143 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 4 80 IPR001199 -
Lja1g4111 143 Pfam Cytochrome b5-like Heme/Steroid binding domain 8 79 IPR001199 -
Lja1g4111 143 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 3 84 IPR036400 -
Lja1g4111 143 PANTHER CYTOCHROME B5-LIKE 1 137 - -
Lja1g4111 143 SMART Cyt_b5_2 7 80 IPR001199 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g4111 Lja-Chr1 52124282 52125258 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g4111 2 138 NADPH P450 reductases AT5G48810 43.796 9.93e-36 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g4111 - - gmx:113001935 222.631
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g4111 1 52124282 52125258 Lja1g4111 1 52124282 52125258 ECH