Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g4105 ATGCAGTCAAGTAGGGTGCTCTTGTGCTCATCCACCAATTCATTGTCGGGGTCAGCCGTCACTCCCACACTTGCCTCTTTTCCCAGATTCCCAGCACCACTCTCAGCAAAGATAGCAAACTCAACATCATCATCATCATCATCATCATCCTCCTCGATTCGCTTCCAAAATTCTCCACCACTCCGCTCCACTGCTTCTTCTTCTTCTTCCTCAGCGAATATGGCTTCGCAAGACCCGCGCATAGCAACAATCTCCTCTGCGATCCGAGTCATTCCTGATTTTCCCAAGCCAGGTATCATGTTCCAGGATATAACCACTCTGCTTCTTGATCCCAAGGCTTTCAAGGATACCATTGACTTGTTTGTTGAGAGGTACAGAGATCAAAACATTTCTGTTGTCGCAGGCGTTGAAGCAAGAGGTTTTATATTTGGCCCTCCCATTGCATTAGCCATTGGTGCAAAATTTGTCCCCATGAGGAAACCCAAGAAATTGCCAGGACCGGTTATCTCAGAAGAGTATTCGTTGGAGTATGGAACTGATAAAATTGAGATGCACGTGGGGGCTGTACAAGCTGGAGAACGAGCCTTGATCATAGATGATCTTATTGCTACTGGAGGAACGTTAAGTGCTGCAATTAGGCTACTAGAACGTGTTGAGGTGCAAGTTGTTGAGTGTGCTTGTGTGATTGAATTACCAGAGTTAAAGGGGCGGGAAAGGCTGGGCGACAAGGCGCTATTCGTCTTAGTTAATGGATCTTGA 759 0.4664 MQSSRVLLCSSTNSLSGSAVTPTLASFPRFPAPLSAKIANSTSSSSSSSSSSIRFQNSPPLRSTASSSSSSANMASQDPRIATISSAIRVIPDFPKPGIMFQDITTLLLDPKAFKDTIDLFVERYRDQNISVVAGVEARGFIFGPPIALAIGAKFVPMRKPKKLPGPVISEEYSLEYGTDKIEMHVGAVQAGERALIIDDLIATGGTLSAAIRLLERVEVQVVECACVIELPELKGRERLGDKALFVLVNGS* 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g4105 252 PANTHER ADENINE PHOSPHORIBOSYLTRANSFERASE 68 250 - -
Lja1g4105 252 Hamap Adenine phosphoribosyltransferase [apt]. 84 251 IPR005764 GO:0003999|GO:0005737|GO:0006168
Lja1g4105 252 MobiDBLite consensus disorder prediction 41 76 - -
Lja1g4105 252 Gene3D - 71 250 IPR029057 -
Lja1g4105 252 PANTHER ADENINE PHOSPHORIBOSYL TRANSFERASE, PHOSPHORIBOSYLTRANSFERASE-LIKE PROTEIN-RELATED 68 250 - -
Lja1g4105 252 Pfam Phosphoribosyl transferase domain 110 246 IPR000836 -
Lja1g4105 252 SUPERFAMILY PRTase-like 83 245 IPR029057 -
Lja1g4105 252 CDD PRTases_typeI 118 248 IPR000836 -
Lja1g4105 252 TIGRFAM apt: adenine phosphoribosyltransferase 85 249 IPR005764 GO:0003999|GO:0005737|GO:0006168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g4105 Lja-Chr1 52074335 52078046 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g4105 77 250 PRT Gene Family AT1G27450 85.632 2.93e-109 311
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g4105 K00759 - gmx:100777103 315.464
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g4105 1 52074335 52078046 Lja1g4105 1 52074335 52078046 ECH