Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g4041 ATGTTTTTTATTGAGGATTCCTGGGAACTGCTTCAGCTTCTCATTGGAAAAACAGTGAAAGAACCGATTTCTCATCATTCAACGATGAACTCCACCGCTTGTGGAGGCGGCGGCGCCGGGGAAGAACTCTGTCGAGATGACTCAGCAGCGTTTGTTCTCAAGTTCGTCGCCATGGCGTCCATTCTCCTTGCCGGCATGGCCGGAATTGCCATCCCTCTCATCGGGAAACACCGCCGCTTCCTCCGCACCGATGGGAACCTCTTCGTCGCCGCCAAGGCCTTCGCGGCGGGGGTGATTCTTGCTACCGGGTTCGTCCACATGCTCTCCGACGCGACGAAAGCGCTCAACAGTCCTTGCTTGCCGGAGTTTCCATGGTCCAAGTTTCCCTTCACCGGTTTCTTTGCTATGGTGGCGGCGCTATTCACACTCCTCCTTGACTTCGTCGGAACTCAGTACTACGAGCGGAAGCAGGGGCTGAACCGTGTCCCCGACGAGCAAACGCGGGTCGGGTCGTCGGAGCCTGAAACCGTGAAGGTGTTTGGGGAAGAAGAGAGCGGTGGAATGCACATTGTGGGGATGCATGCACACGCGGCGCATCATAGACACAACCACCCTCATGGACAGGACGCGTGTCACGGCATTGGCGGCGTCAAGGAGCACGGCCATGCTCACGCTCACGGCCATGCTCTCATAAGTGTTGCTGATGACGGCGAAGAAATTGATGTCAGACACGTTGTTGTTTCACAGGTCTTGGAGCTTGGGATTGTATCACATTCAGTGATAATTGGGTTGTCTCTGGGAGTTTCACAGAGTCCTTGTACCATAAGGCCTCTGATTGCTGCACTATCTTTCCATCAGTTCTTTGAAGGGTTTGCACTTGGAGGCTGCATTTCTCAGGCACAGTTCAAGACTTCATCAGCAACAATCATGGCTTGTTTCTTCGCACTGACTACCCCGGTGGGTATAGGCATTGGAACTGGTATTGCTTCAGTGTATAACCCTTACAGCGCTGGCGCCCTTGTAGCAGAAGGGATTTTGGACTCGTTGTCAGCAGGGATTTTAGTGTACATGGCTTTAGTGGACTTGATAGCTGCTGATTTTCTCAGCAAAAGAATGAGTTGTAATTTTAGGCTGCAGATAGTTTCTTATTGCATGCTTTTCCTTGGTGCTGGATTAATGTCCTCGCTTGCAATATGGGCATGA 1203 0.5212 MFFIEDSWELLQLLIGKTVKEPISHHSTMNSTACGGGGAGEELCRDDSAAFVLKFVAMASILLAGMAGIAIPLIGKHRRFLRTDGNLFVAAKAFAAGVILATGFVHMLSDATKALNSPCLPEFPWSKFPFTGFFAMVAALFTLLLDFVGTQYYERKQGLNRVPDEQTRVGSSEPETVKVFGEEESGGMHIVGMHAHAAHHRHNHPHGQDACHGIGGVKEHGHAHAHGHALISVADDGEEIDVRHVVVSQVLELGIVSHSVIIGLSLGVSQSPCTIRPLIAALSFHQFFEGFALGGCISQAQFKTSSATIMACFFALTTPVGIGIGTGIASVYNPYSAGALVAEGILDSLSAGILVYMALVDLIAADFLSKRMSCNFRLQIVSYCMLFLGAGLMSSLAIWA* 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g4041 400 PANTHER ZINC/IRON TRANSPORTER 29 400 - -
Lja1g4041 400 Pfam ZIP Zinc transporter 52 397 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Lja1g4041 400 PANTHER ZIP ZINC/IRON TRANSPORT FAMILY PROTEIN 29 400 - -
Lja1g4041 400 TIGRFAM zip: ZIP zinc/iron transport family 41 400 IPR004698 GO:0005385|GO:0016021|GO:0071577
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g4041 Lja-Chr1 51199827 51202543 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g4041 1 400 Inorganic Solute Cotransporters AT1G60960 65.385 3.48e-176 496
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g4041 K14709 - gmx:100812212 617.461
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g2996 5 58756390 58762569 Lja1g4041 1 51199827 51202543 PCT