Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g4036 ATGAGCGTTGAGGAAGATGATGACCCAGAAAGGAGGAGATTGATGATACAATCGTGTTCTTCTTCTCGGTTCAGCAACTTCCACCGCGATCTCATGGCGGGGGCGATCATGGGTGGGGTGGTGCACACCATTGTAGCCCCAATTGAGAGGGCCAAGCTCTTGTTGCAGACGCAGGAAAGCAATTTGGCTATTGTTGCCAGTGGCCGTCGCAAATTCAAGGGCATGTTGGATTGCATATTCCGCACTGTTAGGGAAGAAGGGGTTGTCTCTTTGTGGCGTGGCAATGGTAGCAGTGTTCTTCGTTATTATCCTTCTGTTGCACTCAACTTCTCTCTCAAGGATCTTTACAAAAGCATGTTAAGAGGAAATTCTTATGATGACAATCTTTTCTCTGGTGCATCTGCTAACTTTGTTGCTGGGGCTGCAGCAGGTTGTACATCACTTGTCTTAGTATACCCTCTTGACATTGCACACACCCGCCTTGCTGCTGACATTGGAAGAACAGAAGTGCGTCAATTTCGAGGCATTCACCATTTCTTAGTCACCATATTCCATAAGGATGGGATTCGGGGGATTTACAGGGGTCTCCCTGCATCTCTACATGGAATGGTGGTCCACAGAGGCCTTTATTTTGGAGGCTTTGACACCATCAAAGAGATGCTAACTGAAGAATCAGAACCTGAGGTGGCCTTGTGGAAGCGTTGGTTGGTAGCTCAGGCAGTCACAACCTCTGCTGGTTTGATATCTTATCCATTAGACACGGTTCGCCGGAGGATGATGATGCAGTCCGGCATGGAAAAGCCAGTGTACAAAAGCACCATCGACTGCTGGAAGAAGATCTATAGGACTGAAGGTTTGGCTTCATTTTACCGTGGGACTGTTTCAAATGTGTTTAGGAGCACTGGTGCTGCAGCTATCTTAGTTTTGTATGACGAGGTTAAGAAATTCATGAACTGGGGGAGATTGTAA 969 0.4716 MSVEEDDDPERRRLMIQSCSSSRFSNFHRDLMAGAIMGGVVHTIVAPIERAKLLLQTQESNLAIVASGRRKFKGMLDCIFRTVREEGVVSLWRGNGSSVLRYYPSVALNFSLKDLYKSMLRGNSYDDNLFSGASANFVAGAAAGCTSLVLVYPLDIAHTRLAADIGRTEVRQFRGIHHFLVTIFHKDGIRGIYRGLPASLHGMVVHRGLYFGGFDTIKEMLTEESEPEVALWKRWLVAQAVTTSAGLISYPLDTVRRRMMMQSGMEKPVYKSTIDCWKKIYRTEGLASFYRGTVSNVFRSTGAAAILVLYDEVKKFMNWGRL* 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g4036 322 SUPERFAMILY Mitochondrial carrier 25 312 IPR023395 -
Lja1g4036 322 ProSiteProfiles Solute carrier (Solcar) repeat profile. 25 119 IPR018108 -
Lja1g4036 322 PRINTS Mitochondrial carrier protein signature 43 57 IPR002067 GO:0055085
Lja1g4036 322 PRINTS Mitochondrial carrier protein signature 146 164 IPR002067 GO:0055085
Lja1g4036 322 PRINTS Mitochondrial carrier protein signature 193 211 IPR002067 GO:0055085
Lja1g4036 322 PRINTS Mitochondrial carrier protein signature 94 114 IPR002067 GO:0055085
Lja1g4036 322 PRINTS Mitochondrial carrier protein signature 30 43 IPR002067 GO:0055085
Lja1g4036 322 PRINTS Mitochondrial carrier protein signature 238 260 IPR002067 GO:0055085
Lja1g4036 322 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 21 321 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Lja1g4036 322 Pfam Mitochondrial carrier protein 230 318 IPR018108 -
Lja1g4036 322 Pfam Mitochondrial carrier protein 26 123 IPR018108 -
Lja1g4036 322 Pfam Mitochondrial carrier protein 134 223 IPR018108 -
Lja1g4036 322 PRINTS Adenine nucleotide translocator signature 27 39 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Lja1g4036 322 PRINTS Adenine nucleotide translocator signature 105 117 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Lja1g4036 322 PRINTS Adenine nucleotide translocator signature 131 144 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Lja1g4036 322 PRINTS Adenine nucleotide translocator signature 72 93 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Lja1g4036 322 PRINTS Adenine nucleotide translocator signature 234 250 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Lja1g4036 322 ProSiteProfiles Solute carrier (Solcar) repeat profile. 131 220 IPR018108 -
Lja1g4036 322 Gene3D Mitochondrial carrier domain 29 319 IPR023395 -
Lja1g4036 322 ProSiteProfiles Solute carrier (Solcar) repeat profile. 233 316 IPR018108 -
Lja1g4036 322 PANTHER ADP,ATP CARRIER PROTEIN-RELATED 21 321 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g4036 Lja-Chr1 51127490 51131747 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g4036 14 314 Antiporters AT5G13490 39.739 2.05e-68 217
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g4036 K05863 - gmx:100797251 551.977